Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01380 ATGGCATCATCTTCTATGTTGTTCTTCTCACTCTCCACCATCTTCCTCTTCATTTCACCTTCATTCTCCTCTCCAACTCAAACTACAACTTGCCCCTCAGGCGACTCTTTCACGGCCGAGAGCCTCATCAGAGGCCTTAACCTATTCCCTAAAGGCTCCATTAACAGAATAGAGAGTAACACTCATCTTGTCCCTGGAAAGATTGTGAAGAAGAAGCTCACATTCCCTTACAATCTTGCTTCTTCTTCTTCTGGTACATCTGTTCAAGATCTTGCTCACCATGCAGGGTACTATCGCCTTCCTCGTTCCAAAGCGGCAAGGATGTTCTACTTTTTCTTCGAATCTCGCAATAAGAAGGAAGACCCTGTTGTCATATGGTTGACCGGAGGACCAGGGTGCAGCAGTGAGCTTGCTTTATTTTATGAGAATGGTCCTTTCCAAATCACAAAGAACTTGTCTCTTGTTTGGAATGAATTTGGCTGGGACAAGGCATCAAATATTCTTTTTGTAGACCAGCCTATTGGGACAGGCTTTAGTTATACTTCTGATGATGATGACATCCGCCATGATGAAGCAGGTGTTAGCAATGATCTCTATGATTTCTTGCAGGCATTTTTCAAGGAGCACCCCCAATTTGTCAAGAATGATTTCTACATCACTGGAGAGTCATATGCTGGACACTACATTCCAGCTCTTGCATCAAGGGTTCACCAAGGCAACAAAGCAAAGGAAGGAATAATAATCAATCTCAAGGGTTTTGCTATTGGTAATGGTTTGACCAATCCAGAAATTCAGTACCAAGCATACACAGACTATGCATTAGACAGAGGACTGATTAAAAAGTCTGATTATGATAGTATCAGCAAGTTGATCCCATCATGCAAAGATGCCATAAAAAGCTGTGGTACTGATGGTGGAGATGCATGTATGACTTCATTATATAAATGCAATGCCATATTCAGTCGGATAATGTCCATCGCCGGCGACATTAATTACTATGACATTAGAAAGAAATGCGAGGGAAATCTGTGTTATGACTTCTCCAATGTAGAGACATTCTTAAACGAGAAGACAGTTAGGGATGCTTTAGGTGTTGGGGACTTGGACTTTGTTTCGTGCAGTAGCATAGTCTATGATGCTATGATGCAGGACTGGATGAGAAATCTCGAAGTTGGAATCCCGGCTCTTCTTGAGGATGGAATCCAGGTTCTTGTATATGCTGGAGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCAATGGAGTGGTCAGGTCAAAAGGAGTTTGAAGCAGCTTCTACTGTCCCATTTTTGGTAGATGGCGCAGCAGCAGGGACTCTTAAAAGCCATGGACCTCTTGCGTTCCTCAAGGTGAACGAAGCTGGGCACATGGTTCCCATGGATCAACCAAAAGCTGCACTTCAGATGCTAACAAACTGGATGCAAGGGAAACTAACACCGAAAAATGGTGGGGCTAATGTCTCTCCTAAATGA 1509 0.4321 MASSSMLFFSLSTIFLFISPSFSSPTQTTTCPSGDSFTAESLIRGLNLFPKGSINRIESNTHLVPGKIVKKKLTFPYNLASSSSGTSVQDLAHHAGYYRLPRSKAARMFYFFFESRNKKEDPVVIWLTGGPGCSSELALFYENGPFQITKNLSLVWNEFGWDKASNILFVDQPIGTGFSYTSDDDDIRHDEAGVSNDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRVHQGNKAKEGIIINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIKKSDYDSISKLIPSCKDAIKSCGTDGGDACMTSLYKCNAIFSRIMSIAGDINYYDIRKKCEGNLCYDFSNVETFLNEKTVRDALGVGDLDFVSCSSIVYDAMMQDWMRNLEVGIPALLEDGIQVLVYAGEEDLICNWLGNSRWVHAMEWSGQKEFEAASTVPFLVDGAAAGTLKSHGPLAFLKVNEAGHMVPMDQPKAALQMLTNWMQGKLTPKNGGANVSPK 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01380 502 Gene3D alpha/beta hydrolase 76 498 IPR029058 -
Adu08g01380 502 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Adu08g01380 502 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 491 IPR001563 GO:0004185|GO:0006508
Adu08g01380 502 PANTHER SERINE CARBOXYPEPTIDASE 3 27 491 - -
Adu08g01380 502 SUPERFAMILY alpha/beta-Hydrolases 91 490 IPR029058 -
Adu08g01380 502 Pfam Serine carboxypeptidase 90 488 IPR001563 GO:0004185|GO:0006508
Adu08g01380 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Adu08g01380 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Adu08g01380 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Adu08g01380 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01380 Adu-Chr8 23423419 23426240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01380 K16298 - gmx:100785987 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01380 08 23423419 23426240 Adu08g01380 08 23423419 23426240 ECH
Adu08g01380 08 23423419 23426240 Adu03g00102 03 934853 940272 PCT
Adu03g00101 03 927841 931958 Adu08g01380 08 23423419 23426240 PCT