Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00102 ATGGCATCAAAAAGGTCTCTCATCACTCTTTGTTTGTTCTTGTTCTACTTTTCATTAACATTATGTTTGTGTTATGGAACAAGAACATTGTCTCCATTATCATCATCCACAAATGATGTTCTTCTTAGGATGTCCCCAGCAGAAAGGCTGATAAGAAGCTTCAATCTGTTTCCAAGAAAATCAGTAAACATAAGAAAAGGAAGTAGTGATGATGTGTTTGTCCCTGGAAAATTAGTGGAGAAGAAGTTCTCATTTCTTGCTGATTCTTCTGTTCAAGAATTAGGTCATCATGCCGGCTATTATTCTCTCCCTCGTACCAAAGCCGCAAGGATGTTCTATTTTTTCTTTGAATCTCGGAACAATAATAGCAAAGATGCACCAGTTGTGATATGGTTGACTGGAGGACCAGGATGTGGCAGTGAACTTGCATTGTTCTATGAGAATGGTCCTTTCAAAATTACTAATAACATGTCTCTTGTTTCCAATGACTATGGTTGGGACAAGGTTTCAAACCTTATATATGTTGATCAACCAACTGGGACAGGGTTCAGCTACAGTTCTGATGAGTCAGACCTTCGCCATGATGAAACGGGTGTTAGCAACGATCTTTACGATTTCTTACAGGCATTTTTCAAACAGCATCCTCAGTTTGTTAACAATGATTTTTATATCACCGGAGAATCATATGCTGGACACTATATTCCAGCTCTTGCATCTCGAATTCATCAAGCTAACAAACAAAAACAAGCCATTCTTATAAATCTAAAGGGTTTTGCTATTGGCAACGGATTAACCAATCCGGGGATTCAATATGCAGCATACACGGATTTTGCATTATCCAATAAATTAATTACACAGAGTGATTACAACAACATCAACTCCAGGGTCCAAGGATGTGAACAAGAAGTAAAAAATTGCGCAACTGAAGGTGGAGACCATTGTGCCGCCGCTAAAGCCACATGCGACCAAATATTCCAAAGTATCCTTAGCGCTGCTGGCAACGTTAATTACTATGACATTAGAAAAAAATGTGAAGGAGCTTTGTGCTATGACTTCTCAAACGTGGATAAACTCTTAAACGATAATTCAGTGAAGAAGGCTTTAGGTGTGGATGATGATTTGGACTATGTTTCATGCAGTGATGAAGTGTATTTTGATATGGTTAATGACTTCATGGTCAATTATGATGTGGGTATTCCACCTCTTCTTGAAGATGGGATTAGGTTTCTTGCCTATGCTGGTGAAGAAGATCTCATTTGCAATTGGCTAGCAGGTAATATCAGATGGGTTAGTGCCATGAAATGGTCAGGTCAAAAAGAGTTTAACGCAGCTCCTACAGTCCAATATAAAGTCAATGGTGTAGAGGCAGGGTCTCTATCAAGCCATGGACCTCTCACTTTCTTGAAGAGGAATGAAGGAAGTGGCAGAGTTTTGAATCAAACACTATCATTATTTCGAACCACTCTTTCATTCTCACTCTCATTTCTTCAATCGGTTAAGAGCAATATATGA 1512 0.3882 MASKRSLITLCLFLFYFSLTLCLCYGTRTLSPLSSSTNDVLLRMSPAERLIRSFNLFPRKSVNIRKGSSDDVFVPGKLVEKKFSFLADSSVQELGHHAGYYSLPRTKAARMFYFFFESRNNNSKDAPVVIWLTGGPGCGSELALFYENGPFKITNNMSLVSNDYGWDKVSNLIYVDQPTGTGFSYSSDESDLRHDETGVSNDLYDFLQAFFKQHPQFVNNDFYITGESYAGHYIPALASRIHQANKQKQAILINLKGFAIGNGLTNPGIQYAAYTDFALSNKLITQSDYNNINSRVQGCEQEVKNCATEGGDHCAAAKATCDQIFQSILSAAGNVNYYDIRKKCEGALCYDFSNVDKLLNDNSVKKALGVDDDLDYVSCSDEVYFDMVNDFMVNYDVGIPPLLEDGIRFLAYAGEEDLICNWLAGNIRWVSAMKWSGQKEFNAAPTVQYKVNGVEAGSLSSHGPLTFLKRNEGSGRVLNQTLSLFRTTLSFSLSFLQSVKSNI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00102 503 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Adu03g00102 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Adu03g00102 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Adu03g00102 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Adu03g00102 503 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 39 472 - -
Adu03g00102 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 472 IPR001563 GO:0004185|GO:0006508
Adu03g00102 503 Pfam Serine carboxypeptidase 94 470 IPR001563 GO:0004185|GO:0006508
Adu03g00102 503 SUPERFAMILY alpha/beta-Hydrolases 95 471 IPR029058 -
Adu03g00102 503 Gene3D alpha/beta hydrolase 78 490 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00102 Adu-Chr3 934853 940272 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00102 K16298 - gmx:100789937 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00102 03 934853 940272 Adu03g00102 03 934853 940272 ECH
Adu08g01380 08 23423419 23426240 Adu03g00102 03 934853 940272 PCT