Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01275 ATGGAGTTGTTTTCCTCTTCCCTCACTGCTACTACTATACTACTCTATGTAGTAACGCCATTATTGTACTTGTGCTTCCTTGTGTGGAAGGTGGTGAATCACAAAAGGGACCATGAATGCTACATTTTAGGGTACCAATGCTACAAGCCAGGCGATGATAGAAAGCTTGGAACTCAATGCAGCGGCAGCATCATATCCAGGAACAAAACCTTGGCTCTCAACGACTTCAAGTTCCTTCTCAAAGCCATTGTCAGCTCCGGCATTGGCGAAGAAACTTACGTTCCAAGGAACTTCCTCCAAGGCCGCGAGTCTAACCCTACCGTAAACGACGCCGTTTCGGAAATGGACGAGTTTTTTCACGACTCGATCGCCAAACTCCTCGCCAAAACCGGCGTCTCCGCCTCCGACATCGACGTACTAGTGGTCAACGTCTCCATGTTCCCGTCAGTCCCGTCGCTGACTTCAAGAATCATCAACCACTACAAGATGAGGGACGACGTGAAGGCTTTCAACCTCACCGGCATGGGGTGCAGTGCAAGCTTGGTATCTCTTGACGTAGTCCAGAACATTCTCAAGTCGCAGAGAAACAAGTGTGCTTTGTTGGTTACTTCAGAGTCCTTGAGCCCTAACTGGTACTCAGGGAACGACAGATCCATGGTCCTCGCCAATTGTTTGTTTCGAACCGGAGGATGCGCTATTCTTTTGAGTAACAAGAGTTGGTTGAAGCATAAAGCCATATTCAAGCTCAAGTGCTTGGTGAGAACCCACCATGGCGCCAAAGATGATGCATACGGTTGTTGCAACCAAAAGGAGGACGATGAAGGTAGGCTTGGGTTCTACCTAGGGAAGAATCTCCCTAAGGCAGCAACAAGAGCCTTTGTTGACAATTTAAGAGTCTTATCCCCCAAGATTTTACCAGCTAGGGAGATGCTTAGATTCTTACTCGTTTCCCTCCTCAGAAAATTTAAATCTGTCACGTCAGCACCTAAAGTAGCAGCTCTAGCAACAAACACAAAATATGGTAATAAATCGCCTTTGAATTTAAAGACCGGAGTAGATCATTTCTGTTTGCACACGGGAGGGAAGGCGGTTATTGATGGGATAGGGATGAGTTTGGATCTGAGTGAGTATGATCTGGAGCCGGCGAGGATGACGCTGCACCGGTTTGGGAACACGTCAGCAAGCAGCTTGTGGTATGTTTTAGCGTACATGGAAGCTAAGAGGAGGCTCAAGAGAGGGGACAGGGTATTGATGATAAGCTTTGGTGCGGGATTTAAATGTAACAGCTGTTTGTGGCAAGTAATGAAGGATGTTGAGGATAGGAATGTGTGGGATGAATGCATTGATCAGTATCCACCACACTCCCTTGCCAACCCCTTCATGGAGCAGTACGGTTGGATCAATGCTGTTCAGGATCCAACCAACTTCAACCTTCTTAGTCAACCTGCTACTAACTAA 1458 0.4719 MELFSSSLTATTILLYVVTPLLYLCFLVWKVVNHKRDHECYILGYQCYKPGDDRKLGTQCSGSIISRNKTLALNDFKFLLKAIVSSGIGEETYVPRNFLQGRESNPTVNDAVSEMDEFFHDSIAKLLAKTGVSASDIDVLVVNVSMFPSVPSLTSRIINHYKMRDDVKAFNLTGMGCSASLVSLDVVQNILKSQRNKCALLVTSESLSPNWYSGNDRSMVLANCLFRTGGCAILLSNKSWLKHKAIFKLKCLVRTHHGAKDDAYGCCNQKEDDEGRLGFYLGKNLPKAATRAFVDNLRVLSPKILPAREMLRFLLVSLLRKFKSVTSAPKVAALATNTKYGNKSPLNLKTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLAYMEAKRRLKRGDRVLMISFGAGFKCNSCLWQVMKDVEDRNVWDECIDQYPPHSLANPFMEQYGWINAVQDPTNFNLLSQPATN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01275 485 Gene3D - 81 434 IPR016039 GO:0016746
Adu08g01275 485 PANTHER 3-KETOACYL-COA SYNTHASE 14 473 IPR012392 GO:0006633|GO:0016020|GO:0016747
Adu08g01275 485 CDD CHS_like 21 432 - -
Adu08g01275 485 Pfam FAE1/Type III polyketide synthase-like protein 34 321 IPR013601 GO:0006633|GO:0016020|GO:0016747
Adu08g01275 485 SUPERFAMILY Thiolase-like 33 435 IPR016039 GO:0016746
Adu08g01275 485 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 466 IPR012392 GO:0006633|GO:0016020|GO:0016747
Adu08g01275 485 PANTHER 3-KETOACYL-COA SYNTHASE 14 473 - -
Adu08g01275 485 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 352 433 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01275 Adu-Chr8 21794428 21796254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01275 23 478 Acyl Lipid Metabolism Gene Families AT1G07720 65.000 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01275 K15397 - gmx:100776947 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01275 08 21794428 21796254 Adu08g01275 08 21794428 21796254 ECH
Adu08g01275 08 21794428 21796254 Adu03g00221 03 2149262 2151277 PCT