Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00221 ATGGATCTCATCACTTTACTAACCCTCCTTCCAGCATTGTACTTGTGTTTCCTGATCTGGAACTTGTTCGATCAGAAAAGGGACCAAGAGTGCTACATATTAGACTACCAATGTTACAAACCTTCTGATGATAGAAAGCTAGGGACAGAGTTCTGCGGCAGAGTCATCAAAAGATCCCAATCCTTAGGCCTTGATGAGTACAAGTTCCTCCTCAAAGCCATTGTTAGCTCCGGCATTGGTGAGCAAACTTACGCTCCAAGAAACGTCTTCGACGGCCGCGAATCCAACCCTACCCTTACCGACGGTATTGTGGAAATGGAGGAGTTTTTCAACGATAGCATTGAAAAATTGTTGTTGAGGACAGGTGTAAACCCATCGGAGATTGATGTGTTGGTTGTTAATATTTCAATGCTGGCGGTTCTTCCTTCTTTGTCCTCCAGAATCATCAACAAGTACAAGCTAAGGCATGATATCAAGGTCTACAACCTCACCGGTATGGGGTGTAGTGCTAGTCTTATTTCTTTGGACATTGTAAAGAACATTTTCAAGTCGCAGAGGAATAAGCTAGCACTCTTGGTAACTTCAGAGAGCTTGAGTCCAAATTGGTATTCAGGTAACGAGAGATCAATGATTCTAGCTAACTGCTTGTTTCGCTGCGGCGGTTGCGCGATTTTGCTGACGAACAAGAGGACATTGAAGCACAAATCAATGTTCAAATTGAAGTGTTTGGTGAGAACTCATCATGGAGCTAGAGATGAAGCTTATGGTTGTTGCATTCAAAAGGAAGATGAACAAGGTAGACTTGGTTTTCACCTTGGGAAAACCCTCCCAAAAGCAGCAACAAGAGCTTTCATTGACAATTTGAGGGTAATTTCACCCAAGATTCTTCCAACAAGGGAATTACTAAGATTCTTTGTTGTATACCTAATAAAGAAAATCACAATGTTGGGAAAAAGTAACAATTATAACACTCTCAAGGCTAGTTCTGGAGTTATCACAACGACGAAATCGCCGTTGAATTTTAAGACCGGCGTGGATCATTTCTGTATTCACACCGGAGGTAAAGCCGTTATAGACGGAATAGGAATAAGTTTAGATCTGGCTGAGTATGACCTCGAACCGGCACGGATGACTCTGCACCGGTTCGGGAACACCTCAGCCAGTAGCCTTTGGTATGTTCTAGGGTACATGGAGGCAAAGAAGAGGCTGAGAAAAGGTGAGAGGGTGTTCATGATAAGCTTTGGTGCTGGCTTTAAATGCAATAGCTGTTTGTGGGAAGTGATGAGAGATCTCAAAGGTGATCAAGAAAATGTGTGGGCCGATTGCATTGATAACTACCCACCAAAATCATTGTCTAACCCTTTCATGGAGAAGTATAGTTGGATCAATGATGTTGAGGATGAAAGCACCGCTGAGATCCCTGATTTTCTCAAGTAA 1437 0.428 MDLITLLTLLPALYLCFLIWNLFDQKRDQECYILDYQCYKPSDDRKLGTEFCGRVIKRSQSLGLDEYKFLLKAIVSSGIGEQTYAPRNVFDGRESNPTLTDGIVEMEEFFNDSIEKLLLRTGVNPSEIDVLVVNISMLAVLPSLSSRIINKYKLRHDIKVYNLTGMGCSASLISLDIVKNIFKSQRNKLALLVTSESLSPNWYSGNERSMILANCLFRCGGCAILLTNKRTLKHKSMFKLKCLVRTHHGARDEAYGCCIQKEDEQGRLGFHLGKTLPKAATRAFIDNLRVISPKILPTRELLRFFVVYLIKKITMLGKSNNYNTLKASSGVITTTKSPLNFKTGVDHFCIHTGGKAVIDGIGISLDLAEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLRKGERVFMISFGAGFKCNSCLWEVMRDLKGDQENVWADCIDNYPPKSLSNPFMEKYSWINDVEDESTAEIPDFLK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00221 478 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Adu03g00221 478 PANTHER 3-KETOACYL-COA SYNTHASE 1 468 IPR012392 GO:0006633|GO:0016020|GO:0016747
Adu03g00221 478 SUPERFAMILY Thiolase-like 243 428 IPR016039 GO:0016746
Adu03g00221 478 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 461 IPR012392 GO:0006633|GO:0016020|GO:0016747
Adu03g00221 478 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 345 426 IPR013747 -
Adu03g00221 478 SUPERFAMILY Thiolase-like 17 231 IPR016039 GO:0016746
Adu03g00221 478 CDD CHS_like 19 425 - -
Adu03g00221 478 Gene3D - 71 427 IPR016039 GO:0016746
Adu03g00221 478 PANTHER 3-KETOACYL-COA SYNTHASE 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00221 Adu-Chr3 2149262 2151277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00221 19 475 Acyl Lipid Metabolism Gene Families AT2G28630 70.282 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00221 K15397 - gmx:100809149 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01275 08 21794428 21796254 Adu03g00221 03 2149262 2151277 PCT