Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01251 ATGGGAGACATGGTGGACTATTCTAATTCTAACATGACCAGGAACCCCAAACAAGGCAGTGTTGCAACTGGGAAAAAATCATATAGAAAATCACTGATTTTGTCTCGCCCTAAATCTGTTGTGCTGAGATATCATCAGCACCTTGTTTCACTGATTGATGGTGACTTTGGAACCAGTGCCGTCGGCCGCATCACAATTTTTGCGCTTAAAGTTGCTGCTTTAGAGATTGTAAGGAGGTTCTCCAAAAGCAAATGTCCATTTGTATGGAAAGGCCTTCAGGCACTCCAGATACTCTGTTATCCGCCTTTCCAATGGATTCAGAGATGGGCACCCTTTAAAGGTTTAGTGGAAAGTATGCAGGTCCTATCAAGACCACTACTAGCCCTTTCAATTGCAACAATTTTCTCTGACCAATCAAAATTAAGTGATGGAAAGTCAGATTGTGTTACTGATTCACATAGTGATTTAGTAAAATCCTCAGAATTATCTACTGTGCAGGCTGATATGAATACAAGTCAGTGCTCGACAGATTCCAAAATTTTAGAATCTGAATATTGGTTGTCTCAACTCTTTCAAGAGCTTGAAAGTCAAGGGATTTGTTTGCCAGAAAGAATCAATAATGATGAGCTCCGAAGATTTTATGCAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAAAAGACCGTACGCTGGCGAGAGGCTTACAGAATTCTTACTGAAGAAGAGCTGGAAAAGTGGTCAAAAGTTGTGTTTTGGCATGGATATGATGTGATGCACAGACCTTGCCTCATTGTAAAGCTTGGGCTAGCTTGCAGTACACTGGCATCTGAAGATAGACCTCGATTTGCTCAGGCAGTGGTATCACATGTAGAACATGGAATCGTGCAGTTGGTTGATGCAGACAATCCCCAAATTACTGTCTTGGTGGACTGTGAAGGGTTATCTCCATTGAAAATTCCCATGCAAATGATGAAATCTTGTTGTTCGCTGCTGCAAGAGCACTTCCCAAATCGTCTTGGTTGTTTGTTTGTCATACGACTCCCAGAAGTTCTTAATTTTACTGCCCAGAGCTTTATCCAGAGTTTGGAGCCTACAACTCGGAAAAAGTTGAAAATGGAAGGGAAGATGTATCATAAGGTTCTTACTGATAATCTTCCAGCACTGCCATCATATCTCGGAGGCTGCTGCACTTGCTCAGAATGCTCTGAAATTGGCAATGGTAGAATGCTGCAACCTCATACAGCAGGGACCAGCAGGGGAGATAATGTGGGAGGTATTAGTGATAGTGACAATGAGGATTCAACATCATTGCATTTGCATCGTTCCAATGAATCCGAAGATCATTCGTTTGGTAACTATGAGCAGTTGTTGAGAACCGTTCTCATAGGTTTTCTCATATTTTGGGTTTTCATATCTCTTGGATTTGTTATGTATGATGCCGGTAGTCACCATTTCCTCTCATCATAA 1476 0.414 MGDMVDYSNSNMTRNPKQGSVATGKKSYRKSLILSRPKSVVLRYHQHLVSLIDGDFGTSAVGRITIFALKVAALEIVRRFSKSKCPFVWKGLQALQILCYPPFQWIQRWAPFKGLVESMQVLSRPLLALSIATIFSDQSKLSDGKSDCVTDSHSDLVKSSELSTVQADMNTSQCSTDSKILESEYWLSQLFQELESQGICLPERINNDELRRFYAASNNDFSCFLTSIKKTVRWREAYRILTEEELEKWSKVVFWHGYDVMHRPCLIVKLGLACSTLASEDRPRFAQAVVSHVEHGIVQLVDADNPQITVLVDCEGLSPLKIPMQMMKSCCSLLQEHFPNRLGCLFVIRLPEVLNFTAQSFIQSLEPTTRKKLKMEGKMYHKVLTDNLPALPSYLGGCCTCSECSEIGNGRMLQPHTAGTSRGDNVGGISDSDNEDSTSLHLHRSNESEDHSFGNYEQLLRTVLIGFLIFWVFISLGFVMYDAGSHHFLSS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01251 491 MobiDBLite consensus disorder prediction 1 24 - -
Adu08g01251 491 SMART sec14_4 247 400 IPR001251 -
Adu08g01251 491 MobiDBLite consensus disorder prediction 415 449 - -
Adu08g01251 491 Pfam CRAL/TRIO domain 250 397 IPR001251 -
Adu08g01251 491 MobiDBLite consensus disorder prediction 415 435 - -
Adu08g01251 491 CDD SEC14 243 397 IPR001251 -
Adu08g01251 491 Gene3D - 180 421 IPR036865 -
Adu08g01251 491 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 243 403 IPR001251 -
Adu08g01251 491 SUPERFAMILY CRAL/TRIO domain 251 402 IPR036865 -
Adu08g01251 491 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 10 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01251 Adu-Chr8 21557987 21561270 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01251 - - gmx:100786215 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01251 08 21557987 21561270 Adu08g01251 08 21557987 21561270 ECH
Adu08g01251 08 21557987 21561270 Adu03g00259 03 2416191 2420511 PCT