Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00259 ATGGGAGAGAGGGTGGAAGGTTCTAATTTGAGCGTGACTGCTAAACCGAACAATGCTATCAGTGAGAAGAAAACTTACAAAAAGCCTCTGGTGTCATCTCGCCCCAAAGATTTTGAACACAGAAATACCGAACACCTTCTTTCTTTGACCCGTGATGGATTTGGAAGCAGCCCTGTAGGCCGTCTCACATTTTTTCTAATCAAAGTTGCGGCACTAGAGGCCGTAAGAAGGGTATCCAAGAGTAGATGTCCATGTGTATGGCGAGGTTTACAGGGTCTACAAATCCTTGTCTATCCACCATTTAAATGGATTCAGAGATGGTCACCCTTCAAGGGTTTGGTCAGAAGTATGCAGGTACTATCAAGACCATTATTAGTCCTTTCCATTGCAACTGTTTTTACAGACGAATCACAATGTAGTGATGGGACACCAGAGTATATTACTGATCCCCATGATTCAGAAGCATCTGCAGATCTGTCTTCAGTCCCAGCCAATTCAAGTATAGGTCATAGCGAGAGCGATCCTGAAGTTTTAGAATATGAGAAATGGTTGATTCAGCTCAAGCAAGAGTTGGAAATTCAAGGGATTAGTTTGCCAGAAAGAATCGATGACGATGAGCTCCACAGATTTTACTCAGCTTGTAATAATGACGTTTCAAGCTTCTTTACAGCAATCAAGAAGACAATTCAATGGCGGGGGAGTTACAAAATTTTGTCAGAAGAAGAGCTAGAGAGTTGGTCAAGTTTGGTGTTCTGGCATGGGTTTGATGTGATGCAAAGACCTTGCCTTATTGTAAGGCTTGGCCTAGCTTGTAGATCATTGGTGTCTCGTGATAGACCTCAATTTGCTCAGGCAGTTATATCACAGGTTGAATATGGAGTCTTGCACTTGGTCAGTGCGCACAACCCTCAGATTACAGTATTGGTGGACTGTGAAGGGCTATCTCCGTTGAGAATTCCCATGAAAACCTTGAGATCTTGTTCTTCCCTTCTGCAAGATCACTTTCCTAATCGACTTGGTGGTTTGTTTGTCATACGACTACCATCTGTCGTTCGAGTCATTGCCCAGACATTTATTTCGGTTTTAAAGTCAACTACCAGGAAAAAGTTGAAAATAGGAGAGATTCATCAGAAATTTCTTCGGGATAATCTGCCGACACTACCAGCATACCTTGGAGGGTCCTGCACTTGCATTGTATGTTGTAGAATTGGCAAGAGGAATGTGCTCCAACCTGGTGCAACTGGAACCAGCAGCATACATAGGGAGATAAATATCAGTGACAATGAGGATTCTTCATCACTGCATTCATCATCCAATAGTGACTTGGATGAGCAGCAGAACAATAAATATGACCAGTTGTTGAAAACAGCCATCATAAGCATTCTAGTATTTTGGGTTTTGGTAGCTATTTCTGCTGGAATATACACTCCTGAAAATCGTTTGGTCTAA 1449 0.4231 MGERVEGSNLSVTAKPNNAISEKKTYKKPLVSSRPKDFEHRNTEHLLSLTRDGFGSSPVGRLTFFLIKVAALEAVRRVSKSRCPCVWRGLQGLQILVYPPFKWIQRWSPFKGLVRSMQVLSRPLLVLSIATVFTDESQCSDGTPEYITDPHDSEASADLSSVPANSSIGHSESDPEVLEYEKWLIQLKQELEIQGISLPERIDDDELHRFYSACNNDVSSFFTAIKKTIQWRGSYKILSEEELESWSSLVFWHGFDVMQRPCLIVRLGLACRSLVSRDRPQFAQAVISQVEYGVLHLVSAHNPQITVLVDCEGLSPLRIPMKTLRSCSSLLQDHFPNRLGGLFVIRLPSVVRVIAQTFISVLKSTTRKKLKIGEIHQKFLRDNLPTLPAYLGGSCTCIVCCRIGKRNVLQPGATGTSSIHREINISDNEDSSSLHSSSNSDLDEQQNNKYDQLLKTAIISILVFWVLVAISAGIYTPENRLV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00259 482 Pfam CRAL/TRIO domain 249 393 IPR001251 -
Adu03g00259 482 Gene3D - 178 438 IPR036865 -
Adu03g00259 482 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 240 399 IPR001251 -
Adu03g00259 482 SUPERFAMILY CRAL/TRIO domain 249 398 IPR036865 -
Adu03g00259 482 SMART sec14_4 244 396 IPR001251 -
Adu03g00259 482 CDD SEC14 250 393 IPR001251 -
Adu03g00259 482 MobiDBLite consensus disorder prediction 138 173 - -
Adu03g00259 482 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 14 480 - -
Adu03g00259 482 SUPERFAMILY CRAL/TRIO N-terminal domain 181 238 IPR036273 -
Adu03g00259 482 MobiDBLite consensus disorder prediction 154 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00259 Adu-Chr3 2416191 2420511 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00259 - - gmx:100814843 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01251 08 21557987 21561270 Adu03g00259 03 2416191 2420511 PCT