Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02481 ATGCCTCTCAGACTCGAAATCAAGAGGAAGCTTGCGCAAAGATCAGAAAGAGTAAAATCTGTGGATCTACATCCGACAGAACCATGGATTCTTGCAAGTTTATACTCTGGAACTGTCTGTATCTGGAACTTCCAATCTCAGACTATGGCCAAATCTTTTGAGGTTACTGAGTTGCCAGTTAGGTCAGCCAAGTTTATTGCACGCAAACAGTGGGTTGTTGCTGGAGCAGATGATATGTTTATTCGTGTATATAATTACAACACAATGGATAAAGTCAAAGTATTTGAGGCACATACAGATTACATTCGGTGTGTGGCTGTTCATCCTACACTTCCTTATGTGCTGTCATCATCTGATGATATGCTTATTAAGCTTTGGGATTGGGAAAAAGGCTGGGTTTGTACCCAGATATTTGAGGGACATTCTCATTATGTCATGCAAGTAACATTTAATCCAAAAGACACAAACACCTTTGCTAGTGCATCTCTTGATCGCACCATAAAGATTTGGAATCTTGGCTCTCCTGATCCTAATTTTACATTGGATGCCCACCAGAAAGGTGTGAATTGCGTTGATTACTTTACAGGTGGTGACAAACCTTATCTGATCACTGGCTCTGATGATCACACTGCCAAGGTATGGGATTATCAGACCAAAGGTTGTGTCCAGACCCTTGAAGGTCACACGCACAATGTTTCTGCTGTGTGCTTTCATCCGGAGCTTCCTATAATAATTACTGGTTCTGAGGATGGTACAGTACGAATATGGCACTCTACCACTTATAGGCTTGAGAACACATTGAACTATGGTCTTGAAAGGGTTTGGGCCATTGGATATATGAAAGGATCACGTCGCGTTGTGATTGGCTATGATGAAGGGACTATTATGGTTAAACTTGGTCGAGAAGTACCTGTGGCTAGCATGGACAACAGTGGGAAAATTATTTGGGCTAAGCATAATGAAATTCAAACTGTCAATATAAAAAGTGTAGGAGCAGATGTGGAGGTTGCTGATGGAGAAAGGTTACCCTTGGCTGTTAAGGAGTTGGGCACTTGTGATCTCTACCCACAAAACTTAAAGCACAACCCAAATGGGAGATTTGTTGTTGTATGTGGAGATGGTGAGTATATTATATACACTGCATTGGCATGGAGAAATAGGTCTTTTGGTTCAGCTCTCGAATTTGTTTGGTCTTCTGATGGAGAGTATGCTGTCAGAGAAAGCACATCAAAGATCAAAATTTTCAACAAAAATTTCCAGGAGAAGAGGAGTGTCCGACCAACATTTTCAGCAGAACGTATTTTTGGAGGCACTTTATTAGCGATGTGCTCAAATGATTTCATCTGCTTTTATGATTGGGCAGAATGCAGGTTAATTTATCGGATTGATGTCAATGTGAAAAACCTCTACTGGGCCGATAGTGGTGATCTTGTCACAATTGCTAGTGATACATCATTCTATATCCTGAAGTACAATCGTGACATAGTTGCTTCACATTTAGTTAGTGGAAGACCTGTAGATGATGAAGGTGTTGAAGATGCCTTTGAGCTCCTTCATGAGATGAGTGAACGTGTCAGGACAGGCATTTGGGTTGGGGATTGCTTTATCTACAACAATTCCTCTTGGAGACTGAATTACTGTGTTGGTGGCGAGGTAACAACAATGTTTCATTTGGACCGCCCTATGTATTTATTGGGTTACCTTGCAAACCAAAGCCGGGTATATCTGATTGACAAAGAGTTTAATGTTATGGGATACACACTGCTTTTAAGCTTGATTGAGTACAAGACATTAGTTATGCGCGGTGATATTGAAAGGGCCAATGAAGTCCTACCATCAATTCCTAAGGAGCATCTTAACAGTGTGGCTCGATTCTTGGAATCACGGGGGATGATAGAGGAGGCTCTTGAAGTAGCTACTGACCCTGATTACAGATTTGAACTAGCAATACAGCTTGGAAGATTAGAAGTTGCAAAGAGTATTGCAACAGAAGTGCAGAGTGAGTCTAAATGGAAGCAGTTGGGAGAATTAGCTATGTCTAATGGAAGGTTAGATATGGCTGAGGATTGTTTGAATCATGCGATGGATTTGAGTGGGTTGTTACTGCTGTATTCTTCTTTAGGAGATGCCGAAGGAATATCAAAACTTGCAACCCTTGCTAAAGAGCAAGGGAAGAACAATGTTGCTTTCCTTTGCTTGTTTATGTTGGGTAGAGTGGAAGATTGCCTTCAACTGTTGATAGAGAGCAATCGGATTCCAGAGGCAGCTTTAATGGCTCGATCTTACCTCCCAAGCAAGGTCTCAGAGATAGTGGCAATTTGGAGAAAAGATCTTAATAAGGTTAATCCAAAAGCTGCTGAATCATTGGCTGATCCTGAGGAATATCCAAATTTATTTGAAGACTGGCAAGTTGCACTTGCTGTTGAATCTAAGGCTGCAGCAACAAGATTGAAGAAGGCGAGGAGCCTCTTGAGAATGGGGACTCTAACCATGAGAATGGAGAAGAGCAGTATACAGAGGCACAGGAGGAGCATAATGGAGAAGAAGGAAGCCAAGAAGAGGCAGTTGAGGCCCGTCAGCCTAAAAGCAATTGGTTGGGGTGGTGTGAAAATCGAAATTTTGTCTCTGTGCTTGCGCCACATCACTAGGTCCCATCAAGACAGTCGGTTCCAGCTTCTGGGCTGTTTGTCTGAGATTTTCACTCAATTCCCTGAAATCCAAAGCTACCGACACAATCGCCCACCATCGTTTCTTGTTTTCCCTCCATTTTTGTACCACGAGTTTGTAAAATAA 2793 0.4196 MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNFQSQTMAKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKGCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKLGREVPVASMDNSGKIIWAKHNEIQTVNIKSVGADVEVADGERLPLAVKELGTCDLYPQNLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSKIKIFNKNFQEKRSVRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIYRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDIVASHLVSGRPVDDEGVEDAFELLHEMSERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDIERANEVLPSIPKEHLNSVARFLESRGMIEEALEVATDPDYRFELAIQLGRLEVAKSIATEVQSESKWKQLGELAMSNGRLDMAEDCLNHAMDLSGLLLLYSSLGDAEGISKLATLAKEQGKNNVAFLCLFMLGRVEDCLQLLIESNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVESKAAATRLKKARSLLRMGTLTMRMEKSSIQRHRRSIMEKKEAKKRQLRPVSLKAIGWGGVKIEILSLCLRHITRSHQDSRFQLLGCLSEIFTQFPEIQSYRHNRPPSFLVFPPFLYHEFVK 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02481 930 Gene3D - 590 798 - -
Adu07g02481 930 PRINTS G protein beta WD-40 repeat signature 202 216 IPR020472 -
Adu07g02481 930 PRINTS G protein beta WD-40 repeat signature 158 172 IPR020472 -
Adu07g02481 930 PRINTS G protein beta WD-40 repeat signature 244 258 IPR020472 -
Adu07g02481 930 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 138 172 - -
Adu07g02481 930 ProSiteProfiles Trp-Asp (WD) repeats profile. 138 180 IPR001680 GO:0005515
Adu07g02481 930 Pfam WD domain, G-beta repeat 133 171 IPR001680 GO:0005515
Adu07g02481 930 Pfam WD domain, G-beta repeat 221 256 IPR001680 GO:0005515
Adu07g02481 930 Pfam WD domain, G-beta repeat 91 127 IPR001680 GO:0005515
Adu07g02481 930 Pfam WD domain, G-beta repeat 177 215 IPR001680 GO:0005515
Adu07g02481 930 ProSiteProfiles Trp-Asp (WD) repeats profile. 225 266 IPR001680 GO:0005515
Adu07g02481 930 PANTHER COATOMER 1 820 - -
Adu07g02481 930 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 225 256 - -
Adu07g02481 930 Pfam Coatomer WD associated region 319 763 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Adu07g02481 930 CDD WD40 17 297 - -
Adu07g02481 930 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 181 218 - -
Adu07g02481 930 PIRSF Beta'-COP 2 862 IPR016453 -
Adu07g02481 930 PANTHER COATOMER SUBUNIT BETA' 1 820 - -
Adu07g02481 930 SUPERFAMILY WD40 repeat-like 3 297 IPR036322 GO:0005515
Adu07g02481 930 ProSiteProfiles Trp-Asp (WD) repeats profile. 181 224 IPR001680 GO:0005515
Adu07g02481 930 SUPERFAMILY NHL repeat 220 492 - -
Adu07g02481 930 Gene3D - 11 300 IPR015943 GO:0005515
Adu07g02481 930 ProSiteProfiles Trp-Asp (WD) repeats profile. 95 127 IPR001680 GO:0005515
Adu07g02481 930 SMART WD40_4 174 215 IPR001680 GO:0005515
Adu07g02481 930 SMART WD40_4 46 85 IPR001680 GO:0005515
Adu07g02481 930 SMART WD40_4 4 43 IPR001680 GO:0005515
Adu07g02481 930 SMART WD40_4 218 257 IPR001680 GO:0005515
Adu07g02481 930 SMART WD40_4 131 171 IPR001680 GO:0005515
Adu07g02481 930 SMART WD40_4 88 127 IPR001680 GO:0005515
Adu07g02481 930 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 95 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02481 Adu-Chr7 78995227 79005841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02481 51 292 Miscellaneous Gene Families AT5G08390 25.403 7.76e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02481 K17302 - gmx:100815780 1594.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02481 07 78995227 79005841 Adu07g02481 07 78995227 79005841 ECH
Adu07g02481 07 78995227 79005841 Adu09g00178 09 1947893 1957130 PCT