Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01759 ATGACACTGTTTCGAAGACTCATCTTCATTGAGCACCAACGGCACCGCCTTTTCAACCTCACATACATTTTCTCTGCTTCTTCTTCTTCTTCTCAATATCATTATCTTCGTTCCTCTCCGTTTTCCTCCGCCACCACCCCTTCCCCGCAGACGCAACCTGACGACCCCGCCCACCGTGGAACATCCCCGCGCACGAGGTGGAGCACTTACGGAGACATTTTTGACAGCCACACCAAAAGAGCCCCCGCAATCAGTGACCGTGAACTAGAAGAACATGAAGAAGATAAACAACTGAAAGAAGAAGAAGAAGAAGATAGTATTGAAAAACTTGGTTGTGCTCTCGAAAAACGTGAGAGGAGCAGAGTGAAGACCGTCAGCACAATAAATAATGACATTTTTGGCAGCCACACTGAAAGAGCCCCCGCAATCAGTGATCATGAACTAGAAGAGCGTGAAGAAGATAAACAACTGAAAGAAGAAGAACAAGAAGTAGTAGAAGAAGAAGAAGAAGATGAGGAGGGAGAAGAAGAAGTTGAAGAACCTCGTCGTGCAATCACAAAACAACGTGAGAGGAGCAGAGTGAAGACCGAGAGCTCAATTCATGGTGGAGATGTTCTTCCGGAGAGAATCATTAGCACCAAGAGAAGCGGCGGCGCGAAGGTGAAGAAGCAGTGGCTTTGCTCCAATTGCGGGTACACAGCTGGGAAATGGTGGGGGATATGCCCCTCCTGCGAGTTATCTGGTACAATGAGGGAGTTTCATGAGGCCAAGGTCACTGATGCTGATAAAAGCAGGGCCAAAAGTGGCTTGGCGGTTTGCGAGGATACCATCCGGTTGTGGCTACCGCAGAACGCTGCTGAGTTGCGTCCTATCAAATTGGAGGAGGTAAACAAAGGATTCAGTCACAAGCAGTGGAGAATCCCTTTTTGTTTGAGAAGTTACAATGGCTTTTTGTTTACTGTTTCTGTTTCCGCCCCGCCCCCCTCATTGACTCTAGTTAGTGGGGATCCTGGTATTGGCAAGAGTACTCTATTGTTACAGATGGCAGCAATGATAGCAAAAGGTTGCAGTGAAGGCAAAGCGTCTCGAGTTTTATACGTATCTGGTGAAGAGAGCCTTGAGCAAATTGGTAACAGAGCAGAACGCCTTGGGATTAAATCAGATATATATTTATATTCAAGTACTGATATTGAGGACATATTGAAGAAAGCTCAGCTTCTTTCCCCGCGTGCTATGGTTGTTGATTCAATACAAACTGTTTATTTGAAAGGGCTATTATCAAGTGCTGGAGGTATTTTGCAGGTGAAGGAATGTACAGCGGCTTTGATGAGATTTGCAAAAACAACTAACATCCCAATTCTATTGGTTGGGCATGTGAACAAAAGTGGAGATGTAGCTGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTGTATTTGGAAGGTGAGAAGTGTTCTTCCTACCGTATGCTCCGTGCTGTGAAAAATCGGTTTGGATCCACTGATGAGCTTGGAGTTTTTGAGATGGTACAATTGGGACTCAAGGCTGTTCCAAATGCCTCTGAAATATTTATCACTGAGCAACCAACACATTCAGATGTTTTAACTGGAATAGCTGTTACTGTACTAATGGATGGTTCAAGAACTTTCTTAATTGAAATTCAGGCACTTTGCCTTTGTCCTTCCCCCATTCCAACTTCGTCAGTGGATCTACAAGTTAATGGGATCCCTACAAAAAGAGCTACTATGATAAAATGTGTTCTTATAAAGCAAGCAGGACTTAAGCTCCAAGATAATGCTGTGTTTTTGAATGTGGTTGGTGGATGGACACTTGCAGAGACTGCTGGGGATCTTGCAATAGCAGCTGCAATTTGTAGCAGTTTCATGGAGTTCCCTATCCCAAAAGGTGTTGCATTCATAGGTGAAGTTGGCCTCGGTGGAGAGCTGCGCATGGTCCCAAGAATAGAGAAAAGGGTAAACACGTTGGCGAAGCTAGGCTACAGAACTTGTGTTGTACCAAAACAAGCTGAAAAGGTTTTAGAAACTGAAGGTCTAGGAAATATGAGAGTTATAGGTTGCAACAATCTGAAAGAGGTTTTGGATGCTATATTCATCACAGAATGA 2127 0.4438 MTLFRRLIFIEHQRHRLFNLTYIFSASSSSSQYHYLRSSPFSSATTPSPQTQPDDPAHRGTSPRTRWSTYGDIFDSHTKRAPAISDRELEEHEEDKQLKEEEEEDSIEKLGCALEKRERSRVKTVSTINNDIFGSHTERAPAISDHELEEREEDKQLKEEEQEVVEEEEEDEEGEEEVEEPRRAITKQRERSRVKTESSIHGGDVLPERIISTKRSGGAKVKKQWLCSNCGYTAGKWWGICPSCELSGTMREFHEAKVTDADKSRAKSGLAVCEDTIRLWLPQNAAELRPIKLEEVNKGFSHKQWRIPFCLRSYNGFLFTVSVSAPPPSLTLVSGDPGIGKSTLLLQMAAMIAKGCSEGKASRVLYVSGEESLEQIGNRAERLGIKSDIYLYSSTDIEDILKKAQLLSPRAMVVDSIQTVYLKGLLSSAGGILQVKECTAALMRFAKTTNIPILLVGHVNKSGDVAGPRVLEHIVDVVLYLEGEKCSSYRMLRAVKNRFGSTDELGVFEMVQLGLKAVPNASEIFITEQPTHSDVLTGIAVTVLMDGSRTFLIEIQALCLCPSPIPTSSVDLQVNGIPTKRATMIKCVLIKQAGLKLQDNAVFLNVVGGWTLAETAGDLAIAAAICSSFMEFPIPKGVAFIGEVGLGGELRMVPRIEKRVNTLAKLGYRTCVVPKQAEKVLETEGLGNMRVIGCNNLKEVLDAIFITE 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01759 708 MobiDBLite consensus disorder prediction 38 107 - -
Adu07g01759 708 Pfam Rubredoxin metal binding domain 225 252 IPR041166 -
Adu07g01759 708 Gene3D - 324 511 IPR027417 -
Adu07g01759 708 PANTHER DNA REPAIR PROTEIN RADA 159 706 - -
Adu07g01759 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 326 510 IPR027417 -
Adu07g01759 708 PANTHER DNA REPAIR-LIKE PROTEINRADA 159 706 - -
Adu07g01759 708 Coils Coil 143 178 - -
Adu07g01759 708 Coils Coil 84 109 - -
Adu07g01759 708 Gene3D - 526 708 IPR014721 -
Adu07g01759 708 PRINTS DNA repair protein radA signature 489 515 - -
Adu07g01759 708 PRINTS DNA repair protein radA signature 227 251 - -
Adu07g01759 708 PRINTS DNA repair protein radA signature 415 439 - -
Adu07g01759 708 PRINTS DNA repair protein radA signature 319 347 - -
Adu07g01759 708 PRINTS DNA repair protein radA signature 454 482 - -
Adu07g01759 708 SUPERFAMILY Ribosomal protein S5 domain 2-like 496 704 IPR020568 -
Adu07g01759 708 MobiDBLite consensus disorder prediction 159 178 - -
Adu07g01759 708 MobiDBLite consensus disorder prediction 179 198 - -
Adu07g01759 708 SMART AAA_5 327 485 IPR003593 -
Adu07g01759 708 ProSiteProfiles RecA family profile 1. 303 459 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Adu07g01759 708 MobiDBLite consensus disorder prediction 136 200 - -
Adu07g01759 708 MobiDBLite consensus disorder prediction 38 72 - -
Adu07g01759 708 MobiDBLite consensus disorder prediction 79 94 - -
Adu07g01759 708 Pfam Subunit ChlI of Mg-chelatase 590 676 - -
Adu07g01759 708 TIGRFAM sms: DNA repair protein RadA 219 700 IPR004504 GO:0003684|GO:0005524|GO:0006281
Adu07g01759 708 Pfam AAA domain 329 463 - -
Adu07g01759 708 MobiDBLite consensus disorder prediction 140 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01759 Adu-Chr7 52773394 52780952 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01759 K04485 - gmx:100791181 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01759 07 52773394 52780952 Adu07g01759 07 52773394 52780952 ECH
Adu07g01759 07 52773394 52780952 Adu09g00328 09 3501525 3506466 PCT