Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01481 ATGCCGACGCCGGTAAGCGCAGCGAGGCAATGCTTGACAGACGAGGCGGCACGTTCTCTCGACGACGCTGTCGCGGTGGCGCGTCGCCGGAGCCACGCCCAGACGACCTCCCTCCACGCAGTCTCTGCTCTCTTGGCCCTCCCTTCCTCCTCCCTCCGCGACGCAATCACCCGATCTCGCACCGTCGTCACCGCCGTAGCCGCAGCCGTAACCGTCTCCCCGCGCCTCCAGCTGCGCGCCCTAGAACTCTCCGTCGGCGTGTCCCTCGACCGCCTCCCCTCCTCCAAACCCTCATCTATCTCCTCCACCGCCGACGACGACGGACCTCCGGTGTCGAATTCCCTCATGGCGGCCATAAAACGCTCCCAGGCGAACCAACGGCGCCACCCGGATACCTTCCACTTGATGCAAATCCACAATCACCAAAACCCTCAGTTCAATCAAGGAACGGCGTCGTTTCTGAAAGTTGAGCTCAAACACTTCGTTCTTTCAATCTTAGATGATCCAATCGTGAGTCGCGTCTTCGGCGAAGCGGGTTTTCGGAGCCCCGACATAAAACTCGCACTTCTTCAGCCTCCTAACCCTCCGCCTTCTTCTAGAATCTTCTCAAGAACGCGCTACCCGCCCCCCCTCTTCCTCTGCAGTCTTGAATCGGGTCGACCCGGACCCGGTTTCTCTTCCGGGTTCCCATTCCTGGACGAGAACTGCAGAAGGGTTGCGGATATTCTAACGCGGAAGAACAAGAGAAACCCTTTGCTTATGGGTGTTTACGCGAAAACCGCGCTCAGAAGCTTCGTTGAGATGATCGAGAAGGGTCGTGGTGTTGCAATGTTCCCACCAGAAATGGCTGCGGTTAATGTCATCTCGGTGGAGAACGAGATTCAAGAATTCTTGATTTCTGGCGCCATGAGTGAGGAGAAGATGGGGTTGAGGTTTGAGGAGTTGGGCCGAGAAGCCGGTCAATGCTCCAATGGTGGTGGTGTTGTTGTGAGCTTTGGGGATGTTGGGGCTTTTGTTAAAGATGGAGTGGATAGTGGTGCTGTTGGGTTTGTTCTTTCGAGGATAACGAGGTTGTTGTTGGACGGTGGTGGTGGTGGAGGGAAGGTTTGGTTGGTTGGGGTGGCGGAGAAGTGTGATGTGTATTCGAAGTTATTGGGTTTGTTCCCAAATGTGGAAAAGGATTGGGATCTGTATCCTATAACCGTGACATCTGCTACCCCTTCAATGGAAGGACTCTACCCTAAATCCAGCTTGATGGGGTCCTTCATTCCGTTTGGTGGGTTCTTTTCTACACCACCTGAAATCAAAACTCCTGTAAGCTGTTCAAGTGCATCTTCTGCGCGTTGTGACGAATGCAATGAAAAATATGAAGAAGAAGTTGCTGATTTGAAGGTTAATGAAGAAAGCACAAGTTTGAACGAGAGGATCCTGGGTTGTCAAAAGAAATGGAACGACATTTGCCGTAATCTTCATCACACCAGATCAGTTGATAATTCTCAAACAAGACCTCAAGCTCCATCACTTGAGGGTTTACGGTTTGGCTCTGGGTTTACGGAAAGCGGCAGTAAAGATCCATCACATATAGAAGTCCAATATTCTAATCAAACTTCCTACCTACCTAGAGAGCCGCCTAGTATTTATCCATTGAAACAGTTGCCATCTGTTCTGGAATCTTCTGATGCAGCCAGCATCAGTAGCGGAACTGATCATGCACTGAAATTTTCAGGGATTCAGTTGACTGATGTGCGGACGCCATGGATTGCCCCTTCCTCTATGGCCAATACAAGTCTTCTTGATCACAGTTCATCTTCATCCCTTACACCTGTGACGACAGATTTAGGATTGGGCACAATATATACATCAGCAGCTCAAGAGCCAGATACCCCAAAACTACAGGATCACAAAAAGCATCTTCCAAACTTGTCGGAATCTCTGTCAATTGATTTTTTTGATGCCCCAAATGAGAATACTTCACACCAAACACCTAGATCTGCTTGCTCTTTTCCAAATTCAGAAGGAAATTTTGATTCGGTAGATCTCAAATCTCTAAATCAACTTCTCGCTGAAAAGGTTGGCTGGCAAGATGATGCCATCTATGCAATAAATCGAAGGCTGTTCCTTTGTAATTCCGGTGCAGGAAAACGTAAAGGCTCCAGAGCTGGCATATGGTTTGCTTTCCTTGGACCAGATAGGATCAGCAAAAAGAAAATTGCTGCAGCTCTTGCAGAGATTATATTTGGAAACAGAGAAAATCTAATATCCGTAGATCTAAGCTTGCTGGACAGGTCTTTCTCATTGAACTCTGTTTTTGATTGCCAAATATCACATTGTCATGATGCGCTGAGAAGGAAGACTGTTGTGGACTATATTGCTGGGGAGTTGAGTAAAAGGCCACTTTCGGTTGTTTTTCTTGATCATGTCGATAAAGCTGATTACCTTGTGCAGACTAGTTTGTCACAGGCATTAAAAACTGGTAAATTTCCAGATTCTCATGGAAGGGAAATCAGCATCAACAACAGAATCTTTATAGTAGCCTCGACTGTCAGTAAAGGTAATAGTAATAGCTCTTCTATATCCGAGGGATCGAAAATGTTCTCTGAGGAAAGAATCCTTGAAGCCAAGAAATTTCAAATGCAGCTAATACTTGGACATACCGCATCTGAGGATGCCATTAAAAGGGGTATCACAAATGTCCAGGTTATTCGTGGAAAAGGGTCCTCCAAACCACCATTTCTTAGCAAAAGGAAGCAAGCTGATACTAATGACTCCAAAGAGGTGGGAAACACATGCAAGATGCAGAAACAGGTCAGGGAGAAATCAAGATCCTATCTGGATCTAAACATGCCGCTAAACGAGGCCGAAGAATGCATCAATGATAATGACAACGAGATGGAAAACTCAGGAGCATGTTCCACTGATATCTGTCTTCAAATTGAAGAAAAAGTGTTATTCAAGCCATTCAATTTTGATGCACTTGCTGATGAATTGTTGAAAAGCATTAGCACACAATTCCAGAGAGCACTTGGTTCAGATTTTCAGCTGGAAATTGAATATGATGTAATGGTACAAATTCTTGCAGCTGCATGGTTATCAGAGAAGAAAAATGCAGTGGAGGATTGGATTGAACGTGTTCTTGGAAGAGCTTTTGCTGAAGCCAAACAAAAAAAACACCGTGCATCACCATCTCAGTATGTGATGAAACTGGTCAACTGTGAATCCAATTTTGTGGAAGAGAATGCTCCTGGTGGATTGTGTCTTCCTTCTAGAATTAACCTCAACTGA 3282 0.4662 MPTPVSAARQCLTDEAARSLDDAVAVARRRSHAQTTSLHAVSALLALPSSSLRDAITRSRTVVTAVAAAVTVSPRLQLRALELSVGVSLDRLPSSKPSSISSTADDDGPPVSNSLMAAIKRSQANQRRHPDTFHLMQIHNHQNPQFNQGTASFLKVELKHFVLSILDDPIVSRVFGEAGFRSPDIKLALLQPPNPPPSSRIFSRTRYPPPLFLCSLESGRPGPGFSSGFPFLDENCRRVADILTRKNKRNPLLMGVYAKTALRSFVEMIEKGRGVAMFPPEMAAVNVISVENEIQEFLISGAMSEEKMGLRFEELGREAGQCSNGGGVVVSFGDVGAFVKDGVDSGAVGFVLSRITRLLLDGGGGGGKVWLVGVAEKCDVYSKLLGLFPNVEKDWDLYPITVTSATPSMEGLYPKSSLMGSFIPFGGFFSTPPEIKTPVSCSSASSARCDECNEKYEEEVADLKVNEESTSLNERILGCQKKWNDICRNLHHTRSVDNSQTRPQAPSLEGLRFGSGFTESGSKDPSHIEVQYSNQTSYLPREPPSIYPLKQLPSVLESSDAASISSGTDHALKFSGIQLTDVRTPWIAPSSMANTSLLDHSSSSSLTPVTTDLGLGTIYTSAAQEPDTPKLQDHKKHLPNLSESLSIDFFDAPNENTSHQTPRSACSFPNSEGNFDSVDLKSLNQLLAEKVGWQDDAIYAINRRLFLCNSGAGKRKGSRAGIWFAFLGPDRISKKKIAAALAEIIFGNRENLISVDLSLLDRSFSLNSVFDCQISHCHDALRRKTVVDYIAGELSKRPLSVVFLDHVDKADYLVQTSLSQALKTGKFPDSHGREISINNRIFIVASTVSKGNSNSSSISEGSKMFSEERILEAKKFQMQLILGHTASEDAIKRGITNVQVIRGKGSSKPPFLSKRKQADTNDSKEVGNTCKMQKQVREKSRSYLDLNMPLNEAEECINDNDNEMENSGACSTDICLQIEEKVLFKPFNFDALADELLKSISTQFQRALGSDFQLEIEYDVMVQILAAAWLSEKKNAVEDWIERVLGRAFAEAKQKKHRASPSQYVMKLVNCESNFVEENAPGGLCLPSRINLN 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01481 1093 Gene3D - 10 192 IPR036628 -
Adu07g01481 1093 Pfam AAA domain (Cdc48 subfamily) 723 877 IPR003959 GO:0005524|GO:0016887
Adu07g01481 1093 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 463 - -
Adu07g01481 1093 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 464 1093 - -
Adu07g01481 1093 MobiDBLite consensus disorder prediction 92 111 - -
Adu07g01481 1093 MobiDBLite consensus disorder prediction 905 927 - -
Adu07g01481 1093 MobiDBLite consensus disorder prediction 495 527 - -
Adu07g01481 1093 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 464 1093 - -
Adu07g01481 1093 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 463 - -
Adu07g01481 1093 Coils Coil 453 473 - -
Adu07g01481 1093 MobiDBLite consensus disorder prediction 92 109 - -
Adu07g01481 1093 ProSiteProfiles Clp repeat (R) domain profile. 8 195 IPR004176 -
Adu07g01481 1093 Gene3D - 670 897 IPR027417 -
Adu07g01481 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 676 848 IPR027417 -
Adu07g01481 1093 CDD AAA 737 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01481 Adu-Chr7 30325389 30330105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01481 - - ahf:112702898 2031.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01481 07 30325389 30330105 Adu07g01481 07 30325389 30330105 ECH
Adu07g01481 07 30325389 30330105 Adu10g01124 10 22967181 22971427 ECH
Adu01g00418 01 5542609 5545171 Adu07g01481 07 30325389 30330105 ECH
Adu10g01124 10 22967181 22971427 Adu07g01481 07 30325389 30330105 ECH
Adu02g02663 02 92496771 92501334 Adu07g01481 07 30325389 30330105 ECH
Adu01g00418 01 5542609 5545171 Adu07g01481 07 30325389 30330105 PCT