Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00723 ATGGGGGATAATTTGGAAAAAGGGCAGGATTACGAACAGAAAGCAGAGAAGAAGCTCGGTGGTTGGGGATTGTTTGGTTCCAAATTCGACGATGCTGCAGACCTATTCGAAAGAGCCGCTAATTGCTACAAGCTCGCAAAATCTTGGGATAAAGCAGGAGCCACCTATGTGAAGTTGGCAAATTGCCATATCAAGTTGGATAGCAAACATGAAGCTGCCGGTGCCTATGTTGATGCAGCACATAGTTACAAAAAAGTTAATATAAGTGAGGCTGTATCTTGCTTAGACCAAGCTGTAAATCTTTTCTGTGAAATTGGAAGAATCACTATGGCAGCTAAATATTTGAAGGAAATTGCGGAGTTGTATGAATCTGAACAGAACATTGAGCAGGCCATTGCTTACTATGAAAAGTCTGCTGACTTTTATGAAAATGAAGAAGGGACAACTTCTGCAAACCAGTGCAAGGCAAAAGTTGCTCAATTTGCTTCTCAACTAGAACAATACCAGAAGGCAATTGAGATTTACGAAGACATAGCACGCCAATCTCTCAACAATAATTTGCTGAAATATGGAGCTAGAGGGCATCTTCTTAATGCCGGCATTTGCCAACTTTGCAAGGGAGACGTTGTCGCTATCACCAATGCGTTGGAGCGATATCAGGAGATGGATCCAACATTTGGAGGCACACGTGAATATAGACTATTGGCGAATATTGCTTCCGCGATGGATGAAGAAGATGTCACAAAATTTACCGAAGTTATCAAGGAATTCGATAGCATGAGCCCTCTGGATTCATTGAAGACAACGCTTCTTTTGAGGGTGAAGGAAAAGCTGAAAGCCAAAGAACTTGAGGAGGATGATCTTACTTAA 870 0.4184 MGDNLEKGQDYEQKAEKKLGGWGLFGSKFDDAADLFERAANCYKLAKSWDKAGATYVKLANCHIKLDSKHEAAGAYVDAAHSYKKVNISEAVSCLDQAVNLFCEIGRITMAAKYLKEIAELYESEQNIEQAIAYYEKSADFYENEEGTTSANQCKAKVAQFASQLEQYQKAIEIYEDIARQSLNNNLLKYGARGHLLNAGICQLCKGDVVAITNALERYQEMDPTFGGTREYRLLANIASAMDEEDVTKFTEVIKEFDSMSPLDSLKTTLLLRVKEKLKAKELEEDDLT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00723 289 CDD SNAP 7 278 IPR000744 GO:0006886
Adu07g00723 289 PANTHER ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 1 289 - -
Adu07g00723 289 Pfam Soluble NSF attachment protein, SNAP 7 278 - -
Adu07g00723 289 SUPERFAMILY TPR-like 6 280 IPR011990 GO:0005515
Adu07g00723 289 Coils Coil 151 185 - -
Adu07g00723 289 Gene3D Tetratricopeptide repeat domain 6 288 IPR011990 GO:0005515
Adu07g00723 289 ProSiteProfiles TPR repeat profile. 112 145 IPR019734 GO:0005515
Adu07g00723 289 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 289 IPR000744 GO:0006886
Adu07g00723 289 PRINTS NSF attachment protein signature 28 47 IPR000744 GO:0006886
Adu07g00723 289 PRINTS NSF attachment protein signature 91 108 IPR000744 GO:0006886
Adu07g00723 289 PRINTS NSF attachment protein signature 119 136 IPR000744 GO:0006886
Adu07g00723 289 PRINTS NSF attachment protein signature 152 175 IPR000744 GO:0006886
Adu07g00723 289 PRINTS NSF attachment protein signature 183 202 IPR000744 GO:0006886
Adu07g00723 289 PRINTS NSF attachment protein signature 224 244 IPR000744 GO:0006886
Adu07g00723 289 PRINTS NSF attachment protein signature 255 275 IPR000744 GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00723 Adu-Chr7 8454984 8463067 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00723 K15296 - gmx:100812517 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01007 10 17748896 17752165 Adu07g00723 07 8454984 8463067 ECH
Adu07g00723 07 8454984 8463067 Adu07g00723 07 8454984 8463067 ECH
Adu10g01007 10 17748896 17752165 Adu07g00723 07 8454984 8463067 PCT