Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00559 ATGCATGTAGTGGGGAAGAACCTCACCAACGCCATCTTCTTCACCCTCTTCTTCTCCGTCGCTTACTACCTCCTCCACCGTTGGCGCGACAAGATCCGCACCTCCACCCCTCTCCCCCTCCTTACCTTCTCCGAGATCTCCGCCATCGTCTCCCTCATCGCCTCCTTCATCTACCTCCTCGGCTTCTTCGGCATCGATTTCGTCCAATCCTTCATCGCCCGCAACTCCAACGACGCATGGGAAGAAGAAGAAGAAAACGAACAACAAAAACTTGAGCAACACCGCCGCGCCACTCAGATCCTCCCTACTCCTCCGCCGCAGCCACAGCAGCCTGAAACCCTAATTCCGTCGATTTCTTCCGCCGACGATGAGGAGATTGTCTGCTCGGTCGTCGACGGCAGGACACCGTCGTACTCGCTTGAGTCGCGTATCGGTGACTGTTTTCGCGCTGCAGCGATTCGCCGCGACGCGCTGCAACGCGTTACCGGGAGATCCTTGAAGGGTCTGCCATTGGAAGGGTTCGATTACGATTCGATTTTGGGGCAGTGTTGTGAGATGCCGGTGGGGTACGTTCAGATTCCGGTAGGTGTGGCGGGGCCGTTGCTTCTGGACGGTGTGCAGTATGTTGTGCCGATGGCGACGACGGAGGGGTGCCTCGTTGCGAGCACAAATCGGGGATGCAAGGCAATCAGCGCCTGCGGTGGGGCCAGCAGTGTTGTGTTGAGGGATGGGATGTCGAGGGCTCCGGTGGTGAGGTTCGGCACTGCGAAGAGGGCGGCGGAATTGAAGTTCTTCTTGGAGGACCCACTTAATTTTGATACACTTTCCGTTGTTTTCAACAGGTCCAGTAGATTTGCAAGGCTTCAGGGTGTTCAGTGTGCTATGGCAGGGAAGAACGTTTATTTGAGATTCACTTGCAGCACTGGTGATGCCATGGGGATGAACATGGTTTCCAAAGGAGTGCAGAATGTTCTTGATTTTCTTCAAAACGATTTCCCTGACATGGATGTCATTGGCATCTCTGGAAATTACTGTTCGGACAAGAAACCCGCTGCTGTAAATTGGATTGAGGGTCGTGGCAAATCAATTGTTTGTGAAGCAATTATCAAAGAAGAAGTGGTGACAAAGGTACTGAAGACCAATGTTGCTGCCTTGGTTGAGCTCAACATGCTGAAAAACCTTGCTGGTTCTGCTGTTGCCGGAGCTCTTGGAGGATATAATGCCCATGCTAGTAACATTGTCTCTGCCATTTTCCTAGCCACTGGTCAAGATCCAGCTCAGAATGTTGAGAGTTCCCATTGCATCACCATGATGGAAGCCGTCAACGAAGGGAGGGACCTTCACATCTCAGTGACTATGCCTTCCATTGAGGTGGGAACAGTTGGGGGTGGGACTCAACTTGCATCTCAGTCTGCATGCTTGAACTTGCTCGGTGTAAAGGGCGCGAGCAAGGAATCACCGGGATCTAACTCAAGACTCTTGGCCAAAATTGTCGCTGGCGCTGTTCTAGCAGGAGAGCTGTCTCTGATGTCTGCTATTGCGGCTGGACAACTAGTCAGGAGCCATATGAAATACAACAGATCAAGCAGAGATGTGTCTAATTGCACCTCTTGA 1614 0.5242 MHVVGKNLTNAIFFTLFFSVAYYLLHRWRDKIRTSTPLPLLTFSEISAIVSLIASFIYLLGFFGIDFVQSFIARNSNDAWEEEEENEQQKLEQHRRATQILPTPPPQPQQPETLIPSISSADDEEIVCSVVDGRTPSYSLESRIGDCFRAAAIRRDALQRVTGRSLKGLPLEGFDYDSILGQCCEMPVGYVQIPVGVAGPLLLDGVQYVVPMATTEGCLVASTNRGCKAISACGGASSVVLRDGMSRAPVVRFGTAKRAAELKFFLEDPLNFDTLSVVFNRSSRFARLQGVQCAMAGKNVYLRFTCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNYCSDKKPAAVNWIEGRGKSIVCEAIIKEEVVTKVLKTNVAALVELNMLKNLAGSAVAGALGGYNAHASNIVSAIFLATGQDPAQNVESSHCITMMEAVNEGRDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLAKIVAGAVLAGELSLMSAIAAGQLVRSHMKYNRSSRDVSNCTS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00559 537 Coils Coil 77 97 - -
Adu07g00559 537 TIGRFAM HMG_CoA_R_NADP: hydroxymethylglutaryl-CoA reductase (NADPH) 123 527 IPR004554 GO:0004420|GO:0005515|GO:0008299
Adu07g00559 537 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 183 204 IPR002202 GO:0004420|GO:0015936
Adu07g00559 537 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 210 230 IPR002202 GO:0004420|GO:0015936
Adu07g00559 537 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 301 319 IPR002202 GO:0004420|GO:0015936
Adu07g00559 537 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 341 366 IPR002202 GO:0004420|GO:0015936
Adu07g00559 537 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 392 418 IPR002202 GO:0004420|GO:0015936
Adu07g00559 537 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 446 467 IPR002202 GO:0004420|GO:0015936
Adu07g00559 537 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 458 465 IPR023076 GO:0004420
Adu07g00559 537 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 244 360 IPR009023 -
Adu07g00559 537 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 512 525 IPR023076 GO:0004420
Adu07g00559 537 Gene3D - 194 514 IPR023074 GO:0004420
Adu07g00559 537 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 7 536 IPR002202 GO:0004420|GO:0015936
Adu07g00559 537 Pfam Hydroxymethylglutaryl-coenzyme A reductase 151 527 IPR002202 GO:0004420|GO:0015936
Adu07g00559 537 Gene3D - 244 360 IPR009023 -
Adu07g00559 537 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A REDUCTASE 7 536 - -
Adu07g00559 537 Gene3D - 115 193 IPR023282 GO:0004420
Adu07g00559 537 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 119 516 IPR009029 GO:0015936|GO:0016616
Adu07g00559 537 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 303 317 IPR023076 GO:0004420
Adu07g00559 537 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 123 527 IPR002202 GO:0004420|GO:0015936
Adu07g00559 537 CDD HMG-CoA_reductase_classI 124 527 IPR004554 GO:0004420|GO:0005515|GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00559 Adu-Chr7 5818169 5822140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00559 8 533 Lipid Metabolism Gene Families AT1G76490 77.694 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00559 K00021 - zju:107416066 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00559 07 5818169 5822140 Adu05g00308 05 3253463 3259016 ECH
Adu07g00559 07 5818169 5822140 Adu07g00559 07 5818169 5822140 ECH