Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00220 ATGGAGTCCCCACAATCTGTTGTGTCACCATTGAAGAAATCTGTGTTGGTTGATAATGAGAAGCAAAAACATGATGTTTCCTTGTCTAAGGACATTGAAGTCAATGGAACAAAGGATGATTTCATGGGTGTTGTTGATGTTTACATCCATGAGGCCAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCCAAAATTTGTTTGACAAGTGATCCTGATAACTCTGTCTCCACCAAGATCATCAATGGTGGAGGAAACAACCCTGTGTTCAATGAGAATCTAAGTCTAAGTGTTAGGACTGTTGATTCGGCTGTGAAATGTGAGATTTGGATGCTGAGCCGGGTCAGGAACTATCTAGAAGACCAGTTGCTTGGTTTTGCTTTGGTGCCTCTTTCTGAAGTTCTGGTGAATAAGGATTGCAAGCTTGAGAAAGAGTTCTCGCTTTCTTCCACCGATCTTTTCCATTCTCCGGCCGGTTTTGTTCAGCTTTCACTTGCCTACTCCGGTGCTTCCCCTGATGTTATGGCAATATCCTCAATGCCTTTGAAATTGGCTGCAAATGAGATTGACAAGGACTCAGAACCGTGCAGCGAGTCATTGGTGGAAGATTTAGACAAGATTGAGTTCCCTGATCCGAAAATAGCCAAGGAAGATTGCTTAATGGTTTCGGAATACATAAGCATTCAATGTTCTGAGGATGCTGAAAACCATAGCAGTGTTGAATCAATGCAACCTCCACCTCCTCCTAAGGTTGATTCTCCACCAAGCAGTGTATCAACAAATGGAATCTCGTCTCCTTCGGTGGCTGCAAGCTCAGAATCCTCTGCTGCTAAGGAAGAGAAGAAAACTATGGATGTAAAAAATGGTGATACTGATTCCTCGAGTAGGGAAGCATTCGCGAAACCTCTTGTGAGTTTGAAAATTGAGCCAGAGCCAGAGCCAAGCATGGTGCAGCAGGACATAGTAGACATGTATATGAAAAGTATGCAGCAATTCACCGAGTCGTTGGCGAAAATGAAGCTTCCTAATATGGACAGTGAGAAGGGAGTAGCTAGCTCAGGTAACTCCGGCAGCTCTGAGCAGAAGCTTCAGGCGTCAAGGAGTGGTAACTCACGCGTGTTCTATGGTAGTAGAGCTTTCTTCTGA 1158 0.4396 MESPQSVVSPLKKSVLVDNEKQKHDVSLSKDIEVNGTKDDFMGVVDVYIHEARDIHNICIYHKQDVYAKICLTSDPDNSVSTKIINGGGNNPVFNENLSLSVRTVDSAVKCEIWMLSRVRNYLEDQLLGFALVPLSEVLVNKDCKLEKEFSLSSTDLFHSPAGFVQLSLAYSGASPDVMAISSMPLKLAANEIDKDSEPCSESLVEDLDKIEFPDPKIAKEDCLMVSEYISIQCSEDAENHSSVESMQPPPPPKVDSPPSSVSTNGISSPSVAASSESSAAKEEKKTMDVKNGDTDSSSREAFAKPLVSLKIEPEPEPSMVQQDIVDMYMKSMQQFTESLAKMKLPNMDSEKGVASSGNSGSSEQKLQASRSGNSRVFYGSRAFF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00220 385 MobiDBLite consensus disorder prediction 345 373 - -
Adu07g00220 385 Pfam C2 domain 44 143 IPR000008 -
Adu07g00220 385 SMART C2_3c 44 147 IPR000008 -
Adu07g00220 385 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 242 385 - -
Adu07g00220 385 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 238 - -
Adu07g00220 385 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 173 IPR035892 -
Adu07g00220 385 MobiDBLite consensus disorder prediction 279 298 - -
Adu07g00220 385 Gene3D C2 domain 36 182 IPR035892 -
Adu07g00220 385 MobiDBLite consensus disorder prediction 237 308 - -
Adu07g00220 385 PANTHER EXPRESSED PROTEIN 242 385 - -
Adu07g00220 385 PANTHER EXPRESSED PROTEIN 1 238 - -
Adu07g00220 385 ProSiteProfiles C2 domain profile. 20 150 IPR000008 -
Adu07g00220 385 MobiDBLite consensus disorder prediction 352 373 - -
Adu07g00220 385 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00220 Adu-Chr7 2122557 2125163 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00220 - - gmx:100814102 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00220 07 2122557 2125163 Adu07g00220 07 2122557 2125163 ECH
Adu01g00245 01 3156821 3159368 Adu07g00220 07 2122557 2125163 PCT