Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00245 ATGGATTCACCACATTCTGTTGTGTCACCATTCAAGAGCTTGGTCTTGAATGAGGGTACTGAGAAGCACAAGCATGATGATGTATTTGAGGTGAATGGAAAAGAGGCTGTGATGTCAAATGGGGATGAAGATTCAATTGGCATGCTTGATGTATATATACACCAAGCTAGGGACATTCAGAACATCTGCATATACCATAAGCAAGATGTTTATGCCAAGATTTGCCTCACTTCTAACCCTGATGACACTGTTTCCACCAAGACCATCAATGGTGGAGGAAGGAACCCAGTGTTCAATGAGAATCTAAGGGTTAGTGTTAGGACTATTGATTCCTCACTCAAATGTGAGATTTGGATGCTTAGCAGGGTCAAGAATTACCTTGAGGACCAGTTGCTTGGTTTTGCTTTGGTGCCTTTGTCTGAGGTACTGCTAGTTCAGGATGGGAAATTGGAGAAAGAGTTCTCTCTTTCTTCAACTGATTTGTTCCATTCTCCGGCCGGTTTTGTTCAGTTGTCGCTTTCTTACACTGGTGCTTCGCCAGATGTTATGGCGATTTCTACAATTCCTAAGGAGGTTGGAGCGCAGGACTCCGAGACGGGTGAGTCGCTGACGAGGGATTTGGAAAAGATTGAGTTCCCTGATCCGAAGATTGTGAATGAAGATCACTTGATGCTCGTGGAAAGCTTCTCTGCTTGCAGTGTTGAGTCTGTTCAGCTTCCTCCCAAGGTTGATTCCCCACCCAGCAGTGTGTCAACAAATGGTGTCACCTCTCCGGTGCCTGCAAGCTCGGAATCATCTGAAGCTGCTGCTGCTAATTCCAAGTCTCCCGGTCAGGAACAAATTTCCAGCACCAAAGATGCTAAACATGTGGATGCTATAGATGGTGAGAGTGATTCCTCAAATGGGGTTCTTCCAAGTGTGTCATTCCCTAAGCCTGTTGTTACTGTGAACCTTGTCCCAGAACCGAATTTGGTGCAGCAGGATATAGTAGACATGTACAACAAAAGCATGCAGCAATTTACTGAGTCATTGGCCAAAATGAAGCTTCCTATGGACATAAAAAGTGAGGCAACTAGTTCAGGGAATTCGAGCACTGAGGAGAAGTTGCAGACACCGAAGAGTAACAACTCGCGCGTATTTTATGGTAGCAGGGCTTTCTTCTGA 1164 0.4519 MDSPHSVVSPFKSLVLNEGTEKHKHDDVFEVNGKEAVMSNGDEDSIGMLDVYIHQARDIQNICIYHKQDVYAKICLTSNPDDTVSTKTINGGGRNPVFNENLRVSVRTIDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLLVQDGKLEKEFSLSSTDLFHSPAGFVQLSLSYTGASPDVMAISTIPKEVGAQDSETGESLTRDLEKIEFPDPKIVNEDHLMLVESFSACSVESVQLPPKVDSPPSSVSTNGVTSPVPASSESSEAAAANSKSPGQEQISSTKDAKHVDAIDGESDSSNGVLPSVSFPKPVVTVNLVPEPNLVQQDIVDMYNKSMQQFTESLAKMKLPMDIKSEATSSGNSSTEEKLQTPKSNNSRVFYGSRAFF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00245 387 PANTHER EXPRESSED PROTEIN 225 387 - -
Adu01g00245 387 PANTHER EXPRESSED PROTEIN 1 227 - -
Adu01g00245 387 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 178 IPR035892 -
Adu01g00245 387 MobiDBLite consensus disorder prediction 238 304 - -
Adu01g00245 387 Gene3D C2 domain 42 198 IPR035892 -
Adu01g00245 387 MobiDBLite consensus disorder prediction 352 376 - -
Adu01g00245 387 MobiDBLite consensus disorder prediction 242 283 - -
Adu01g00245 387 MobiDBLite consensus disorder prediction 355 376 - -
Adu01g00245 387 ProSiteProfiles C2 domain profile. 31 154 IPR000008 -
Adu01g00245 387 Pfam C2 domain 48 154 IPR000008 -
Adu01g00245 387 SMART C2_3c 48 151 IPR000008 -
Adu01g00245 387 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 227 - -
Adu01g00245 387 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 225 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00245 Adu-Chr1 3156821 3159368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00245 - - adu:107465117 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00245 01 3156821 3159368 Adu01g00245 01 3156821 3159368 ECH
Adu01g00245 01 3156821 3159368 Adu07g00220 07 2122557 2125163 PCT