Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00178 ATGGTGCTCATGGCAGGGCGCTCCCTCACTTCCTTTGTCAACCCAACACCAACCCAATTCTCTCTTCTCTTTCTTCTCAATCCAAAGTTCTTAACTTGCCACACCCCATTTTCTACTCTCACTCCTCTTCCTTCACCTAAAACCTTGCCTTCTAAGTCTTCTGCTTCAATTGATGCTTCAAGTTCAACGTTGACCAAAAATAACTCAAGGGGTTTCTCCAGAATCTTCAGAAACAATTTCACTGATGGTGTTTGCAAGTACCAGGTGAAAACTCTTCAGACTACCCCTATTTTTGTTGAGGAAGTTCAAGAAAATGAAGCTGTGGATCTATGGCCGAAGATGAAGGAAGAGGCTGAACTTGATGTAACTGAGGAACCTATTCTGAATAGTTACTACCAATCTTCAATTCTGTCTCATGATTCATTGGAATCTGCTTTGGCCAATCACCTTGCTAACAGATTAAGCAGTGCAAGCCTTCCAAGTAACACACTTTTTGATCTCTTTGTTGGGATCTTGAAATCTGACCAAGAAATCATGGATTCTGTGAAGGAAGATCTCAAAGCAGTTAAGGAAAGAGACCCTGCTTGCATAAGCCATGTGCATTGCTTCTTGAACTTCAAAGGCTTCTTAGCATGCCAATCTCATAGAGTTGCTCATAAGCTATGGCTTCAAGGAAGAAAAGTCTTGGCAGTTATGATCCAGAACCGAGTTTCCGAGGTTTTCGCAGTAGATATTCATCCCGGTGCTAAGATTGGAAGTGGGATTCTGCTTGATCATGCAACTGGATTAGTGGTTGGTGAAACTGCAGTGATTGGTAACAATGTGTCAATTTTGCATAGTGTGACTTTGGGTGGAACTGGTAAAGCTTCTGGTGATAGGCATCCAAAGATTGGTGATGGGGTTTTGATTGGTGCAGGGACTTGTATTTTGGGGAACATTAAGGTTGGTGAATGTGCTAAGATTGGTGCTGGTTCTGTGGTGATTAAGGATGTTCCTCCTAGGACTACTGTTGTTGGGAATCCTGCTAAGTTGGTTGGAGGCAAGAACCCTGTTAAGCTGGACAAAATGCCTAGCTTCACCATGGATCATACTTCAAATATTACTGAATTTTATGATTACTGTATTTAG 1128 0.4202 MVLMAGRSLTSFVNPTPTQFSLLFLLNPKFLTCHTPFSTLTPLPSPKTLPSKSSASIDASSSTLTKNNSRGFSRIFRNNFTDGVCKYQVKTLQTTPIFVEEVQENEAVDLWPKMKEEAELDVTEEPILNSYYQSSILSHDSLESALANHLANRLSSASLPSNTLFDLFVGILKSDQEIMDSVKEDLKAVKERDPACISHVHCFLNFKGFLACQSHRVAHKLWLQGRKVLAVMIQNRVSEVFAVDIHPGAKIGSGILLDHATGLVVGETAVIGNNVSILHSVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKVGECAKIGAGSVVIKDVPPRTTVVGNPAKLVGGKNPVKLDKMPSFTMDHTSNITEFYDYCI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00178 375 TIGRFAM cysE: serine O-acetyltransferase 182 343 IPR005881 GO:0005737|GO:0006535|GO:0009001
Adu07g00178 375 MobiDBLite consensus disorder prediction 43 66 - -
Adu07g00178 375 SUPERFAMILY Trimeric LpxA-like enzymes 110 346 IPR011004 -
Adu07g00178 375 Pfam Serine acetyltransferase, N-terminal 110 214 IPR010493 GO:0005737|GO:0006535|GO:0009001
Adu07g00178 375 CDD LbH_SAT 241 341 IPR045304 -
Adu07g00178 375 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 303 331 IPR018357 GO:0016740
Adu07g00178 375 PANTHER SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC 65 375 - -
Adu07g00178 375 PANTHER SERINE ACETYLTRANSFERASE 65 375 - -
Adu07g00178 375 Gene3D serine acetyltransferase, domain 1 95 243 IPR042122 -
Adu07g00178 375 Pfam Bacterial transferase hexapeptide (six repeats) 294 328 IPR001451 -
Adu07g00178 375 Coils Coil 172 192 - -
Adu07g00178 375 Gene3D Hexapeptide repeat proteins 244 365 - -
Adu07g00178 375 SMART SATase_N_2_a 110 214 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00178 Adu-Chr7 1599295 1600422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00178 110 373 Miscellaneous Gene Families AT2G17640 53.788 1.13e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00178 K00640 - ahf:112705240 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00178 07 1599295 1600422 Adu07g00178 07 1599295 1600422 ECH
Adu01g00280 01 3537301 3538494 Adu07g00178 07 1599295 1600422 PCT