Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00280 ATGAAAGTTCTGGTCGTGGGGCGCTCCATCACTTGCCCCTTATATAAGACTTGGAATTTCACTCCAACACCAATTCAATCCACACCCAAAATCTCTCTGCAAGCAATTCACACCCATCTTCTTTCATTTTCATCTTCTTCTTCATCATCATCATCTTCTTCCTCTTCTAATTCTTCTTCTTCCATGGCTACTTGCGTAGATTCCTCAACCTCCTCCCCTTTTTCTCGGAAGCCAAACGGGTCCCAAACTGATGATTGTTCCTATAACTACCTCAAATTCTGCCGACCCACTTTCTCCGATCGTGTTTCCATTCCCAAGAACAAACCCCTGCATACACGCACGGTTATTGAAGAGTCTGAGGCTAAGGTTGATGTTGACGATCGTGTTCATGATGAAGATGATGATGATGATGATGATCTATGGCGGAAGATGAAGGAAGAAGCGAAATCCGATGTGGAACAAGAACCTATTTTATCCAACTACTATTTCAGTTCAATCTTGTGCCACAAGTCTTTAGAAAGCGCGTTATCCAATCATCTTTCCAACAAATTATCCAGCTTGAATCTCAACAGCACCACTCTCGTTGATCTCTTCATGGGGATCTTGGAATCCGACGAAGAAATCATNNNNNNNNNNNNNNNNNCTGCTTGCATAAGCTACGTGCATTGCTTATTGAATTTCAAAGGCTTCTTGGCTTGCCAGGCTCATAGGATCGCTCACAAGCTATGGCTCCAAGGAAGAAAAATTCTAGCCCTCTTGATTCAGAACCGTGTATCCGAGGTTTTCGCGGTCGATATTCACCCTGGGGCGAACATCGGCCGCGGAATCCTTCTGGATCACGCGACTGGCCTCGTCCTAGGCGAGACCGCCGTTATTGGGAACAATGTGTCCATTTTGCACAACGTCACGTTGGGTGGGACCGGAAAAGCCTCCGGCGACCGGCATCCGAAGATCGGTGACGGGGTTTTGATAGGTGCAGGGACTTGTATCTTAGGGAATATTAAGATTGGTGATGGTGCTAAGATTGGTGCTGGTTCTGTAGTGTTGAAGGATGTTCCTCCAAGAACAACTGCAGTTGGGAATCCTGCTAAATTGATTGGAGGAAAAGATAATCCCATTAGGCTTGATAAGATTCCTAGCTTCACTATGGACCATACTTCATATATTTCTGAGTGGTCTGATTATGTTATTTAG 1194 0.4447 MKVLVVGRSITCPLYKTWNFTPTPIQSTPKISLQAIHTHLLSFSSSSSSSSSSSSSNSSSSMATCVDSSTSSPFSRKPNGSQTDDCSYNYLKFCRPTFSDRVSIPKNKPLHTRTVIEESEAKVDVDDRVHDEDDDDDDDLWRKMKEEAKSDVEQEPILSNYYFSSILCHKSLESALSNHLSNKLSSLNLNSTTLVDLFMGILESDEEIXXXXXXXACISYVHCLLNFKGFLACQAHRIAHKLWLQGRKILALLIQNRVSEVFAVDIHPGANIGRGILLDHATGLVLGETAVIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAKLIGGKDNPIRLDKIPSFTMDHTSYISEWSDYVI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00280 397 CDD LbH_SAT 262 362 IPR045304 -
Adu01g00280 397 PANTHER SERINE ACETYLTRANSFERASE 62 397 - -
Adu01g00280 397 Pfam Serine acetyltransferase, N-terminal 140 235 IPR010493 GO:0005737|GO:0006535|GO:0009001
Adu01g00280 397 SUPERFAMILY Trimeric LpxA-like enzymes 138 366 IPR011004 -
Adu01g00280 397 Gene3D Hexapeptide repeat proteins 265 379 - -
Adu01g00280 397 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 324 352 IPR018357 GO:0016740
Adu01g00280 397 MobiDBLite consensus disorder prediction 51 79 - -
Adu01g00280 397 Gene3D serine acetyltransferase, domain 1 123 264 IPR042122 -
Adu01g00280 397 SMART SATase_N_2_a 140 235 IPR010493 GO:0005737|GO:0006535|GO:0009001
Adu01g00280 397 PANTHER SERINE ACETYLTRANSFERASE 62 397 - -
Adu01g00280 397 Pfam Bacterial transferase hexapeptide (six repeats) 315 349 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00280 Adu-Chr1 3537301 3538494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00280 134 385 Miscellaneous Gene Families AT2G17640 52.490 1.15e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00280 K00640 - gmx:606507 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00280 01 3537301 3538494 Adu01g00280 01 3537301 3538494 ECH
Adu01g00280 01 3537301 3538494 Adu07g00178 07 1599295 1600422 PCT