LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu07g00153	ATGGATATAGCACATTACTATTTGGATGGCAATGCTGACGCTGTGGAGTTTTGTCCACATGATTCGTACCACCATGTTCTGGCTGCCTCCACATACAATCTCCAAGAAGGTGACCGTCCCAGTCGACATGGAAGCATTTCTCTCTTCAGTGTTGATGGCAGTGACATAGCTGGTGGTGATGACCACCTTGACTTGGTTTGCAGTGTGGAGACCTCTGGCATTTTCGACATAAAGTGGAGCCCGCCCGGACAGCATTCGAATCCTTTTCTTTCTCAAGCTGATGCTGATGGGTACTTGAGAATTCATGTGCTGGAAAGTAGCTGTAATGAGGTTGAAGGGATTAATCTAAAGCATATGATCAGTGAAAAAATCAGCGACTCTATGTGCTTGTACCTGGACTGGAACCCTTCAGGCACATCCATGACAGTGGGGCTTTCTGATGGCTCTGTATCCATTGTTTCTTTCCTTGAATCCAAGTTGGAAATACAAGAAGAATGGAAGGCACATGACTTTGAACTCTGGACAACCGCATTTGATATCCACCAACCAAATTTGAATTCCAAAGCTCACAAAATGGGTGTTTGTTGCATTCAAAAGAGTTCTCATGATCCAAATAGCTTAGTAACCGGGGGAGGAGTTTGGAGGGTGAAGCACCATCCCTACATTCCAAACTTGGTCTTGGCTGCATGTATGCACAATGGTTTTGCAATTGTTTCCATTAAAGGCAACGAAGCGCAAGTGTTGGAAACTTACAAGAAGCATGATTCCCTTGCATATGGAGCAGATTGGCAGAAAGGTGAAGCAAATCACAGAGTTGACAGAACCAAACCAATTGTGGCTACTTGCTCATTCTATGACAAACTTGTTCGAGAAGGCCTGAAAAAGGTTAGGCTTCAAAAGTCACCAATAACATCTGAATTCTACCCTGCAATGGTGGCAAAAATAAGGCAAAGTGCTATCAGCTCTCCAAAACCAACAAAACCGGAGGTTGGAGAGATTGATACTAGTCCACCTATTCAGTCAGTTAAAGATGCTGTTTCTCTATTTGGTGAAGGTGCTTTCTCCAGCGAGAAACCTTCCATTAAGAAGGCTAAACCTTATTCTGCTGAGAGAGTTTTGGCAAAAGAGACACAACTTCACTTAGCCGAGAAAGAGCTGAACAAATTAAAGGATCAACTAAAGAATGCAGAAACTACTAAGGCTCAAGCCCTAGTGGAGCTTCAAAGGCATAAAAAAGCAGTTGAGGATCTTTCACAAAAGCTAAATGTTCTCAAGGAGTCAAGAGAATTATCAACTAAAGCAACAGAAGCTTCAAATTGTCAAGCCAAACAGCTTAAAGAAGAAAAATGTGGTGATCCTGTTGGAAGCAATGGTGCTTGGAAAGAAGACTTGGAAACCGCAGTTAAAAGATATGCATCTGTTATTACAGAACTTGATGTTGCAAAGCAAGAACTGAGGAATATTCGTCAGGAGTATAATACTTCCTTGGAAGCAAGAGTTTCGGCTTTCAAGCAAGCAGTAGAAGCTGAAGATGCAATGAAGGCAAACACTGAAAGAGCATCTGAGCTATCAAAAGAAATTTTAGCCGTGCAGGAATCAATTGAACGAATGAGGCTTACAGCTCCATTGGCACATCAACCGCAAGAAAGCATATTAACTGATAAAGAAGTTCTACGACAATCATATAGAGCAGCCTTCGAAGAATCAAGAAGGAAATTGCTTGCTTTAAAGAAGGAATTCAGTCCGGACCAAACAGAAAATCTTGAAATGCAGCTGAATGAGACAACAAATAAAATTGGGGCTCTGCAAAAGGAAATAGAAAATAAAAAGACATCAGACTTGGATTCTCTGAAAAGCGTCACTTCGGGGCTTGATAATGCTAAAGAATCCCTGCAGAAAGTAGCAGAAGAGGAAAGCTCCCTAAGAAGCTTGGTTGAGGCTCTTAAGGTGGAACTGGAGTATGTGAGAAGAGAACATGCTGAATTGAAGAAGAAAGAATCTGAAACTGAATCTATTGTTGGAAATCTGCATGTCAAGCTTCGGAAAAGTAAGTCTGAGCTTGAAGCATACTTGGCAGAAGAATCTAAAGTCAGAGGTGCATCTGAGGAAATGATCTTGACATTGAACCGGTTGTTATCTGAAACTGAGAATGCAAAGCAGGAAGCTGAAGATATGAAGAACATGGAAGCTGAACTGAAGATGGAAGCTGAAGTAACCAAACTTGCCTTAGAAGATGCAGAAATAAAGCTTAAAGTAGCATTAGAAGAAGCCGAAGCAGCGAGAGCATCAGAGGCAAGCAGTATTGATCAGATTAGGGTCTTATCTGAGAGGACTAATGCTGCTCGTGCATCAACCTCAGAGCATGGTGCTAAAATTACAATCTCAAAGGAGGAATATGAGTCCTTATCTCGAAAGGTTGAGGAATCTGATAGATTAGCTGACATGAAAGTGGCTGCTGCCAAGGTACAGGTTGAAGCTATCAGGGTGAGTGAAAATGAGGCTCTCAAAAGATTGGAGGCAACACAGAAGGAGATTGATGATATAAAGACTGCAACACTAGAGACCTTGAAAAGCGCTGAGATGGCCGAAGCAGCAAAGAAGGCAGTGGAAACTGAGCTAAAAAGGTGGCGTGAGCGGGAGCAGAAGAAAGCAGAAGAGGCTGCAGCTCGAATATTGGCCGAAGCACAGATGTCACCAAGAGTGTCTCCTCAGCACTACAGGATTCAACAGCACAATCCAACTCCAAAAAAGGTTGAAGTGCAAAAGCTTGAAAAGGGAAAGGTTTCAGTTTCAAAGAAAGTTCTGTTGCCCAACATTAGTGGCATTTTCCATCGGAAAAAGAACCAGGTTGATGGAGGATCTCCCTCTTACCTGCCAGGAGAGGAACCTCTTTGA	2895	0.4252	MDIAHYYLDGNADAVEFCPHDSYHHVLAASTYNLQEGDRPSRHGSISLFSVDGSDIAGGDDHLDLVCSVETSGIFDIKWSPPGQHSNPFLSQADADGYLRIHVLESSCNEVEGINLKHMISEKISDSMCLYLDWNPSGTSMTVGLSDGSVSIVSFLESKLEIQEEWKAHDFELWTTAFDIHQPNLNSKAHKMGVCCIQKSSHDPNSLVTGGGVWRVKHHPYIPNLVLAACMHNGFAIVSIKGNEAQVLETYKKHDSLAYGADWQKGEANHRVDRTKPIVATCSFYDKLVREGLKKVRLQKSPITSEFYPAMVAKIRQSAISSPKPTKPEVGEIDTSPPIQSVKDAVSLFGEGAFSSEKPSIKKAKPYSAERVLAKETQLHLAEKELNKLKDQLKNAETTKAQALVELQRHKKAVEDLSQKLNVLKESRELSTKATEASNCQAKQLKEEKCGDPVGSNGAWKEDLETAVKRYASVITELDVAKQELRNIRQEYNTSLEARVSAFKQAVEAEDAMKANTERASELSKEILAVQESIERMRLTAPLAHQPQESILTDKEVLRQSYRAAFEESRRKLLALKKEFSPDQTENLEMQLNETTNKIGALQKEIENKKTSDLDSLKSVTSGLDNAKESLQKVAEEESSLRSLVEALKVELEYVRREHAELKKKESETESIVGNLHVKLRKSKSELEAYLAEESKVRGASEEMILTLNRLLSETENAKQEAEDMKNMEAELKMEAEVTKLALEDAEIKLKVALEEAEAARASEASSIDQIRVLSERTNAARASTSEHGAKITISKEEYESLSRKVEESDRLADMKVAAAKVQVEAIRVSENEALKRLEATQKEIDDIKTATLETLKSAEMAEAAKKAVETELKRWREREQKKAEEAAARILAEAQMSPRVSPQHYRIQQHNPTPKKVEVQKLEKGKVSVSKKVLLPNISGIFHRKKNQVDGGSPSYLPGEEPL	964

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu07g00153	964	Coils	Coil	471	498	-	-
	Adu07g00153	964	Coils	Coil	372	427	-	-
	Adu07g00153	964	MobiDBLite	consensus disorder prediction	944	964	-	-
	Adu07g00153	964	Coils	Coil	705	763	-	-
	Adu07g00153	964	Coils	Coil	831	851	-	-
	Adu07g00153	964	Coils	Coil	859	886	-	-
	Adu07g00153	964	Coils	Coil	624	665	-	-
	Adu07g00153	964	PANTHER	HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED	314	941	-	-
	Adu07g00153	964	Coils	Coil	585	612	-	-
	Adu07g00153	964	Coils	Coil	506	526	-	-
	Adu07g00153	964	PANTHER	HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED	314	941	-	-
	Adu07g00153	964	Coils	Coil	559	579	-	-
	Adu07g00153	964	MobiDBLite	consensus disorder prediction	895	917	-	-
	Adu07g00153	964	MobiDBLite	consensus disorder prediction	902	916	-	-
	Adu07g00153	964	Pfam	Weak chloroplast movement under blue light	332	541	IPR008545	-
	Adu07g00153	964	Pfam	Weak chloroplast movement under blue light	559	882	IPR008545	-
	Adu07g00153	964	SUPERFAMILY	WD40 repeat-like	43	286	IPR036322	GO:0005515
	Adu07g00153	964	Gene3D	-	8	290	IPR015943	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu07g00153	Adu-Chr7	1421601	1427923	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu07g00153	-		-	gmx:100794569	857.055

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu07g00153	07	1421601	1427923	Adu07g00153	07	1421601	1427923	ECH
	Adu01g00306	01	3879745	3892885	Adu07g00153	07	1421601	1427923	PCT