Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00306 ATGTGCACAGTGTGGTTACAGTGGAGACCCCACTCACTACCCTCAAATAATCTGAGattaggttatactcctattcatattgaagaagctcaggggcatagtggaggtatttgggtgctctcTGCATGGCCCGGAGTATCTTGCAATGTCGTGGCAGCGAGTTCGCAAGTGGTGTGTGTTGAGTTTTCGAATGGCGGTTTCTCTTGGGTCTGTGCAGCAATTTATGCAAGTCCCGTTCCTAGCATAAGGGAAGAAGCTTGGAGGGTTTTGACAGATTTTTCCATAAATTATTCAGGTCCTTTATTAGCTATTGGGGATTTTAATGAGATCCTTCTTTCATCTGAGGTTAAAGGTGGGAACTTTGTCTCTCGAAGGGCAGAGCGGTTTGGAGCTCTCCTAGATGAGTGTGGTTTGATTGATTTGGGAGCTCATGGATCCTTGTACACTTGGTTCAAACATATGCAGGGTAATCGGTTCATCTCGAAGAGGCTGGATAGGGCTGTGGCTACTGATGCTTGGTGTTTTCATTTTCCGGAAAGCTATGTGGAGAATTTGGCGAGGATGCATTCTGACCACTGTCCCATTATGGTGCGATGTCAAGGTAATGATAGAAGAGTCGGGGTAAAACCTTTTCGTTTTCAAGTAGCTTGGTCTTATCACCCAAGTTTTTCGTCGGTGGTCAGGGGTGCTTGGGACAAGGGTAGACCCAATCCTATTCGTTGCCTTTCTCAGGCGCGGATCCCTGAAAAGTTGAGGCTCCTAGTGTGGCTTTGCCTTCATGATGCTGTACCAACTCAATATCTGCGTTTTCGGCGACATCTCTCCTCCTCATCCTTATGTACACGTTGCAATCAACTTCCGGAGACAATTCTTCATTGTTTTCGGGATTGTGAAGTGGTGCGATCAGTTTGGGTTTCTCTAGGTTTTTCTGATGTGTATTTCTTTGACTCTTACGAGGTGCATGATTGGTTCAAGCATGGCCTCCTCAATGAAGGTTGTTCCAAATTTGCAGCTATAATATGGTCAATTTGGCAAGATAGAAATATGGGTAATTTTCAGGGAGTTTTTGGATCTACTGGGTCAATTGCATACAAGGCTCGCAGGTGCATGGTGGATTTTGAATATACAACTCAGAATCGAGTGTGTTGCATCCAGGGATTAAAACCTCTGTCTTGGTCTCCACCAGAACCTGGTGCTTGGAAATTAAATTGTGATGGGAGTGTGAACTTGAGGGATGATTGTGCTGGTTTTGGGTGGGTAATTCGCGATAGCTCCAGTCAATGGGTAATGGGATGCTCAGGAAATTCCTTTGGATCTAGTGTCATCAAGATGGAGTTGTGGAGTATATGGAAAGGTTTGGCTTGGGCTTGGGAGGCGGGTCTTAAGCTTGTTGTCTGTGAGACAGATTGCGCAGCAGCTTTTGAGCTAGTGACTGGTTGGCAAGTTCTACTCTGCCATCTTGAAAAAGAAGTAATACAACTGATCTTTGACTTGAAGTTAAGAAGGGATTGGGATATTCGTTTTGAGCTTATCCCGAGAGAAGCTAATGTCGTGGCAGATCGGTTGGCAAAGATGGGATCTGGAGGTAGCGGAACTGATGAGGTTCACCTTTGGCACCAGCCACCAGAGGTGGTCGTTTTGACCGCCGTGGAGGACTTCGAATTTGAAGTGTTCTTTACGCTCCCGTGTGTGTTGGTTTTACATGCTACCGACTCACCCAACGCAACAAAGCCAGAGGTTGGAGAGATTGACACCAGTCCTCCTTTTCAATCTGTTAAAGATGCTGTCTCTTTATTTGGTGAAGGTGCTTTCTCTGGTGAAAAACCTTTCATTAAGAAGGCAAAACCCTATTCTGCTGAGCGTGTTTTGGCAAAGGAGACACAACTTCATATAGCCCAGAAAGAGTTGAACAAACTAAAGGAACAAGTAAATAATGCTGAAACTACTAAGGCTCAAGCTCTTGTTGAGCTTGAAAGGGCTAAAAGGACAGTTGAGGAACTGACACAAAAGCTAAAAGTTGTCGATGAATCCAGGGAACTAGCGATCATGGCAACAGACACTGCAAAGGATCATGCGAAACAGCTTAAAGAAGTAAAGTATGGTAACTCTGATGGAACAAATGGTGCTTGGAAAGAAGAGCTTGAAGCTGCAGTTAAGAGGCATGCATCCATCATTACAGAACTCAATGCTGCAAAGCTAGAACTCAGCAAGATTCGTCAAGAATATGATTCTTCCTCGGATGCAAGAGAGTCTGCTTTCAAGCAAGTAGCAGAAGCAGAAAATGCGATGAAGGAAAACTCAGAAAGAGCATCTGAGCTGTCTAAAGAAATTACTGCTGTAAAGGAATCAATTGAACAAACCAAGCATGCATCTATTGAAGCACATCAGCAGCAAGCAATGGTGCTAGCTGAGAAAGATGTTCTAAGACGATCATATAAAGCCACCCTTGAACAATCCGAAAAGAAAGTGCTTGATTTAAAGAAAGAGTTCAATCCTGAGCTTGCCAAAAATCTTGAAGCACAGCTGGTGGAGACATTGAGTGAAATTGGTGCTCTGCAAAAGGAAATGGAAAATAAAAGGATGCAGGATTTGGACTCCGTGAAAAGTGTCACTCTGGAACTTGATGACGCCAAGGAGTCACTGCATAAGGTAGCAGATGAGGAAAGCTCTCTTAGGAGCTTGGTGGAAGCTCTTAAGGTGGAACTTGAGAATGTAAAGAAGGAACATTTGGAATTGAAGGAGAAAGAGTCTGAAACTGAATCTGTTGTCGGGAATCTGCATGTCAAGCTTCGTAAAAGTAAGTCTGAGCTTGAAGCCTGCTTGGCAGAAGAATCTAAAGTTAGAGGTGCATCTGAGGAAATGATCTCAACACTGAACCAGCTGCAATCTGAAGCTGAAAATGCACGGCGGGAAGCAGAAGACATGAAGAACAAAGCCACAGAATTGATGAAGGAGGCTGAAGTTACCAAGCTTGCATTAGAAGATGCAGAGGAAAAGCTCAAAGTTGCACTGGAAGATGCAGAAGCAGCAAAAGCAGCAGAGGCGAGTGCCCTTGACCAGATTACGGTGTTAACTGAAAGGACAAGTGCTGCGCGCGCCTTAACATCCGATTCTGGTGCTAAAATTACAATCTCAAGAGAGGAATTCGAGTCGCTAAGTCGTAAAGTTGAGGAATCTGATAAATTAGCAGACATGAAAGTAGCTGCTGCCCAGGCACAGGTTGAGGCTGTGAAGGCAAGTGAAAATGAAGCTATCAAAAGATTAGAGACAGCTCAAAAGGAGATCGAGGATATGAAGACGGCAACACAGGAGGCTTTGAAAAAGGCCGAGATGGCTGAAGCAGCAAAGAAGGCAGTGGAGAGCGAGCTTCGGAGGTGGCGTGAGCGGGAGCAGAAGAAGGCAGCAGAAGCCGCTTCTCGAATATTGGCCGAAACTCAGGTGTCATCGGAATCATCTCCTCAGCACTACAGGATTCAAAAGCAGAACCCTCCTCCTCACAAAATGGAGGCGAAGAAGCTCGAGAAAGAGAAGGTCTCAGTTTCAAAGAAAGTCCTTGTGCCTACCATTAGCGGTATCTTCCACAGGAAGAAAAACCAGGTTGAAGGTGGATCTCCTTTTTTGCCTGGTGAGAATCTTGCATGA 3642 0.4415 MCTVWLQWRPHSLPSNNLRLGYTPIHIEEAQGHSGGIWVLSAWPGVSCNVVAASSQVVCVEFSNGGFSWVCAAIYASPVPSIREEAWRVLTDFSINYSGPLLAIGDFNEILLSSEVKGGNFVSRRAERFGALLDECGLIDLGAHGSLYTWFKHMQGNRFISKRLDRAVATDAWCFHFPESYVENLARMHSDHCPIMVRCQGNDRRVGVKPFRFQVAWSYHPSFSSVVRGAWDKGRPNPIRCLSQARIPEKLRLLVWLCLHDAVPTQYLRFRRHLSSSSLCTRCNQLPETILHCFRDCEVVRSVWVSLGFSDVYFFDSYEVHDWFKHGLLNEGCSKFAAIIWSIWQDRNMGNFQGVFGSTGSIAYKARRCMVDFEYTTQNRVCCIQGLKPLSWSPPEPGAWKLNCDGSVNLRDDCAGFGWVIRDSSSQWVMGCSGNSFGSSVIKMELWSIWKGLAWAWEAGLKLVVCETDCAAAFELVTGWQVLLCHLEKEVIQLIFDLKLRRDWDIRFELIPREANVVADRLAKMGSGGSGTDEVHLWHQPPEVVVLTAVEDFEFEVFFTLPCVLVLHATDSPNATKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPFIKKAKPYSAERVLAKETQLHIAQKELNKLKEQVNNAETTKAQALVELERAKRTVEELTQKLKVVDESRELAIMATDTAKDHAKQLKEVKYGNSDGTNGAWKEELEAAVKRHASIITELNAAKLELSKIRQEYDSSSDARESAFKQVAEAENAMKENSERASELSKEITAVKESIEQTKHASIEAHQQQAMVLAEKDVLRRSYKATLEQSEKKVLDLKKEFNPELAKNLEAQLVETLSEIGALQKEMENKRMQDLDSVKSVTLELDDAKESLHKVADEESSLRSLVEALKVELENVKKEHLELKEKESETESVVGNLHVKLRKSKSELEACLAEESKVRGASEEMISTLNQLQSEAENARREAEDMKNKATELMKEAEVTKLALEDAEEKLKVALEDAEAAKAAEASALDQITVLTERTSAARALTSDSGAKITISREEFESLSRKVEESDKLADMKVAAAQAQVEAVKASENEAIKRLETAQKEIEDMKTATQEALKKAEMAEAAKKAVESELRRWREREQKKAAEAASRILAETQVSSESSPQHYRIQKQNPPPHKMEAKKLEKEKVSVSKKVLVPTISGIFHRKKNQVEGGSPFLPGENLA 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00306 1213 Coils Coil 809 829 - -
Adu01g00306 1213 SUPERFAMILY DNase I-like 18 198 IPR036691 -
Adu01g00306 1213 Coils Coil 867 922 - -
Adu01g00306 1213 Gene3D - 399 528 IPR036397 GO:0003676
Adu01g00306 1213 Coils Coil 622 677 - -
Adu01g00306 1213 Coils Coil 951 1013 - -
Adu01g00306 1213 MobiDBLite consensus disorder prediction 1129 1177 - -
Adu01g00306 1213 Coils Coil 1074 1136 - -
Adu01g00306 1213 Pfam zinc-binding in reverse transcriptase 237 304 IPR026960 -
Adu01g00306 1213 SUPERFAMILY Ribonuclease H-like 399 528 IPR012337 -
Adu01g00306 1213 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 569 1187 - -
Adu01g00306 1213 MobiDBLite consensus disorder prediction 1162 1177 - -
Adu01g00306 1213 Coils Coil 835 862 - -
Adu01g00306 1213 CDD RNase_H_like 402 524 IPR044730 -
Adu01g00306 1213 Coils Coil 711 790 - -
Adu01g00306 1213 MobiDBLite consensus disorder prediction 1142 1159 - -
Adu01g00306 1213 Pfam Reverse transcriptase-like 403 525 IPR002156 GO:0003676|GO:0004523
Adu01g00306 1213 Pfam Weak chloroplast movement under blue light 582 1132 IPR008545 -
Adu01g00306 1213 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 569 1187 - -
Adu01g00306 1213 Gene3D Endonuclease/exonuclease/phosphatase 6 198 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00306 Adu-Chr1 3879745 3892885 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00306 - - gmx:100794569 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00306 01 3879745 3892885 Adu07g00153 07 1421601 1427923 PCT