Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01611 ATGATCTCTAATCGTGTGTTAGTCTTGGATTTGTTGTTCAGATTGTACTTTACAAAAGTGAAGATGGGTTCTCCTCCGAAGGAATTTAATGTCCAGATTGATACTGGGAGTGACATCTTGTGGGTTAATTGCAACAGATGCAGTAATTGTCCACAGTCTAGCGGGCTGGGGACCCAGCTCAATTTCTTTGATGCAGCCAGCTCATCCACTGCTGCACTGGTTTCCTGCTCGGACCCGATATGCACTTATGCGGTTCAAACTGCAACAAGTGAATGCTCCTCTCAGGTTAACCAGTGCAGCTACACCTTTCAGTATGGAGATGGAAGTGGCACAACCGGATATTATGTTTCCGATGCTATCTATCTTGACACGATTGTGGGACAATCTGTGCTTTCTAACTCATCATCTACCATCGTTTTTGGGTGTAGCACCTATCAATCTGGAGATTTGACTAAGACAGAAAAAGCAGTTGACGGAATTTTTGGATTTGGACCTGGTGCTCTATCTGTTATATCGCAGTTGTCATCGAAAGGCATGACCCCCAAAGTTTTCTCGCATTGCTTAAAAGGAGATGGCAATGGAGGAGGCATACTAGTTCTTGGTGAGATATTGGAGCCTGGCATTGTTTATACTCCACTTGTCCCATCACAGCCCCATTACAACTTAAATCTTGAGAGTATTGCTGTCAACGGACAGCTCCTCTCAATTGATCCAGCTGCATTTGGAACATCTAACAATCGGGGAACCATAGTTGACTCTGGTACAACATTGGCATACCTTATTCAAGAAGCTTATGATCCATTTGTCAATGCTATAACTACAACTGTGTCACAGTTTGCCAGACCCATTATTTCTAAAGGAAACCAGTGCTATCTGGTCCCAACCAGCATAGGTGATATATTTCCTTCAGTCACTTTAAACTTTATTGGTGGAGCATCCATGGTTCTGAAACCAGAACAATACCTTATGCATTATGGTTTTCTTGATGGTGCTGCAATGTGGTGCATGGGTTTCCAGAAAGTGCAGGAGGGATTCACAATTTTAGGAGATCTTGTGCTGAAAGATAAGATTTTTGTATATGACTTGGCTAATGAGCGTATTGGATGGACAAACTATGACTGTTCCTTATCAGTAAACGTCTCAGTGGCTGCAACCAAGAGCAAAGATCAGTACATCAATGCAGGAACGCCGAGTGTCAGCAGCTCCCTCATAGGCCATGTGTACAAGTTACTACCTGTAAGCATTGTGGTTCTCCTTGTCCACATGATAGTTTCCATGGTGCCCCCAATTTCGTGA 1296 0.4336 MISNRVLVLDLLFRLYFTKVKMGSPPKEFNVQIDTGSDILWVNCNRCSNCPQSSGLGTQLNFFDAASSSTAALVSCSDPICTYAVQTATSECSSQVNQCSYTFQYGDGSGTTGYYVSDAIYLDTIVGQSVLSNSSSTIVFGCSTYQSGDLTKTEKAVDGIFGFGPGALSVISQLSSKGMTPKVFSHCLKGDGNGGGILVLGEILEPGIVYTPLVPSQPHYNLNLESIAVNGQLLSIDPAAFGTSNNRGTIVDSGTTLAYLIQEAYDPFVNAITTTVSQFARPIISKGNQCYLVPTSIGDIFPSVTLNFIGGASMVLKPEQYLMHYGFLDGAAMWCMGFQKVQEGFTILGDLVLKDKIFVYDLANERIGWTNYDCSLSVNVSVAATKSKDQYINAGTPSVSSSLIGHVYKLLPVSIVVLLVHMIVSMVPPIS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01611 431 Gene3D Acid Proteases 203 380 IPR021109 -
Adu06g01611 431 SUPERFAMILY Acid proteases 8 377 IPR021109 -
Adu06g01611 431 Gene3D Acid Proteases 9 202 IPR021109 -
Adu06g01611 431 CDD pepsin_A_like_plant 16 374 IPR034161 -
Adu06g01611 431 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 13 393 - -
Adu06g01611 431 Pfam Xylanase inhibitor N-terminal 16 201 IPR032861 -
Adu06g01611 431 ProSiteProfiles Peptidase family A1 domain profile. 16 370 IPR033121 -
Adu06g01611 431 PANTHER ASPARTYL PROTEASES 13 393 IPR001461 GO:0004190|GO:0006508
Adu06g01611 431 Pfam Xylanase inhibitor C-terminal 219 370 IPR032799 -
Adu06g01611 431 PRINTS Pepsin (A1) aspartic protease family signature 346 361 IPR001461 GO:0004190|GO:0006508
Adu06g01611 431 PRINTS Pepsin (A1) aspartic protease family signature 249 260 IPR001461 GO:0004190|GO:0006508
Adu06g01611 431 PRINTS Pepsin (A1) aspartic protease family signature 22 42 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01611 Adu-Chr6 49576698 49580015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01611 16 375 Miscellaneous Gene Families AT1G44130 28.534 1.50e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01611 - - gmx:100804147 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01611 06 49576698 49580015 Adu06g01611 06 49576698 49580015 ECH
Adu06g01611 06 49576698 49580015 Adu02g02771 02 93503577 93507680 PCT