Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02771 ATGCGGTGTTCTCTTACAGCGGTGGTTTTCGTTCTGGCCACCGTGGTGGCGGCGGTGGTGGATGCCGGCGTATTGCTTCCCTTGGAACGCGCGGTTCCAACTACTGGCAGCAGGCGCGTGGATGTGGAGTATCTGAGGGCGCGTGACAGAGCGCGTCATGCTCGAATCCTGCGTGGTTCTGGTGGTGGCGGTTATGGTGGTGGTGGCGTAGTTGATTTCTCAGTACAAGGAACCTCCGATCTTAGCTCAGCTGGGTACGGGTTGTATTTTACCAAGGTGAAGATGGGAACACCTCCAAAAGAATTTAATGTGCAGATTGATACCGGAAGTGACATCTTGTGGGTTAGCTGCAATACTTGCAGCAATTGCCCTCAATCTAGTGGACTTGGGATTGAGCTCAATTACTTTGACACGGTTGGCTCATCCACAGCTGCGCTGGTTCCATGCTCAGACTCGATATGTGCTTCTGAGGTTCAAGGTGCAGCTGCTGAATGTTCTCAGGCTAATCAGTGCAGCTATACATTTCAGTATGGAGATGGAAGTGGAACGACAGGATATTATGTTTCTGATGCAATCTATTTTGATATGATCCTGGGACAGTCTTCACTTGCTAACTCTTCAGCGACTGTTGTTTTTGGGTGTAGCAACTATTTGTCTGGAGAATTGACTAAATCAGATAAAGCAGTTGATGGAATTATTGGGTTTGGCCCTGGTCCTCTATCTGTTGTATCACAATTGTCTTCGCGTGGTATAACACCCAAAGTTTTCTCTCATTGTTTAAAAGGAGATGGCAATGGAGGAGGCATACTAGTTCTTGGTCATATTTTGGATCCAAATATAGTTTATACTCCACTGCTTCCATCACAACCTCATTACAACGTAAACCTCCAGGGCATTTCTGTCAATGGACAACCCCTCTCAATTAATGCAGATGTATTTGCAACATCTGCCAATCGAGGAACTATAGTCGACTCCGGTACAACATTGGCATATCTTATTCAAGAGGCTTATGATCCTCTCGTCAATGCAATTACTACAGCAGTGTCACAGTCTACAAATCCTTTTATTTCAAAAGGACTTCAGTGTTATCTTCTCTCAACCAGTATAAGTGATATATTTCCTCAAGTCAGCTTAAACTTTGAGGGTGGGGCATCAATGGTTTTAAAACCAGAACAGTACCTTATGCATAATGGTGTCATGGATGGTCAGTCATTGTGGTGCATCGGTTTCGAGAAAGTGCAGGAGGGAGTCTCAATTTTAGGAGATCTGGTTTTAAAAGATAAGGTAATCATCTATGACTTAGCACATCAACAAATCGGATGGGCCAACTATGACTGTTCCTCCCCTGTAAACGTTTCTGTGGCTACAAGCAAGGATGAGTACATCAATGCCAGACAAACGAGTGTCAGCGGTGCAGATATAGGCATCCTCTCCAAGTTATTACCTGTAAGCATTGTGGCTCTCTCTGTGCACATAGCAATTTTCGCTCCATTTTTGTAA 1500 0.4487 MRCSLTAVVFVLATVVAAVVDAGVLLPLERAVPTTGSRRVDVEYLRARDRARHARILRGSGGGGYGGGGVVDFSVQGTSDLSSAGYGLYFTKVKMGTPPKEFNVQIDTGSDILWVSCNTCSNCPQSSGLGIELNYFDTVGSSTAALVPCSDSICASEVQGAAAECSQANQCSYTFQYGDGSGTTGYYVSDAIYFDMILGQSSLANSSATVVFGCSNYLSGELTKSDKAVDGIIGFGPGPLSVVSQLSSRGITPKVFSHCLKGDGNGGGILVLGHILDPNIVYTPLLPSQPHYNVNLQGISVNGQPLSINADVFATSANRGTIVDSGTTLAYLIQEAYDPLVNAITTAVSQSTNPFISKGLQCYLLSTSISDIFPQVSLNFEGGASMVLKPEQYLMHNGVMDGQSLWCIGFEKVQEGVSILGDLVLKDKVIIYDLAHQQIGWANYDCSSPVNVSVATSKDEYINARQTSVSGADIGILSKLLPVSIVALSVHIAIFAPFL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02771 499 CDD pepsin_A_like_plant 89 446 IPR034161 -
Adu02g02771 499 Pfam Xylanase inhibitor C-terminal 291 442 IPR032799 -
Adu02g02771 499 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 9 464 - -
Adu02g02771 499 PANTHER ASPARTYL PROTEASES 9 464 IPR001461 GO:0004190|GO:0006508
Adu02g02771 499 Gene3D Acid Proteases 275 453 IPR021109 -
Adu02g02771 499 Gene3D Acid Proteases 74 274 IPR021109 -
Adu02g02771 499 Pfam Xylanase inhibitor N-terminal 89 274 IPR032861 -
Adu02g02771 499 SUPERFAMILY Acid proteases 85 449 IPR021109 -
Adu02g02771 499 PRINTS Pepsin (A1) aspartic protease family signature 95 115 IPR001461 GO:0004190|GO:0006508
Adu02g02771 499 PRINTS Pepsin (A1) aspartic protease family signature 321 332 IPR001461 GO:0004190|GO:0006508
Adu02g02771 499 PRINTS Pepsin (A1) aspartic protease family signature 418 433 IPR001461 GO:0004190|GO:0006508
Adu02g02771 499 ProSiteProfiles Peptidase family A1 domain profile. 89 442 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02771 Adu-Chr2 93503577 93507680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02771 87 448 Miscellaneous Gene Families AT1G44130 28.534 2.30e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02771 - - gmx:100820394 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02771 02 93503577 93507680 Adu02g02771 02 93503577 93507680 ECH
Adu06g01611 06 49576698 49580015 Adu02g02771 02 93503577 93507680 PCT