Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00039 ATGGCAACGATGTGGAATTCTTTATGCGTGGCCAATGGCACTCTCTTCAACTCTTCTTCTCCACTTCTTCCTCTTCGTTTCAATTCTAACTCCAACCTTCGATTTCGCCGCGCCACAATCACAAGCATGTGCGTTCCTGAAAACGACGTCGTTGTGATCGGTTACGGAATGACTACAGTTGACTTCTTGGCCACCGTTGACTCTTTTCCGAAGCCCGACGACAAGGTCCGCACCACCTCCTTCAAGGTTCAAGGAGGTGGCAATGCCGGCAACGCCTTAACCTGCGCCGCAAGACTCGGCTTGAAGCCTAAGCTCATCTCCAAGGTCGGCGACGATTCCCAAGGCCACGCTATTCTCAACGAGCTTCAGCGCGACGCCGTCGACACCTCCTTTGTCCTGGTATCAAAGGGTGGTAGTTCCGCGTTTTCGTATATTCTAATCGACAACCAGACAAAAACTCGGACTAGTATTTACACCCCTGCACATCCTCCCATGATGCCAGATGATCAATCCCAATCAACCTTATTATCTGCATTTAATGAAGCAAGATTAGTGTATTTTGATGGACTGACTACCGATACTGCTCTATTCATTGCACAAGAGGCCACTCGAAATAAGATACCGATTTTAGTTGAGGCCGAATCACCTAAGGAAGGATTGGATGAGCTTCTGAAACTTGCTGACTTTGCTGTATGCTCTGCAAGGTTTCCTAAGGCTTGGACACATGCATCATCTATCCCAAGTGCACTGGTTTCCATGCTTTTAAGATTGCCAAATATCAAATTTGTGATTGTGACTTTGGGTGAAGATGGATGTCTAATGTTGGAAAGAAGTGCAAACGAGGATGCTGATACAGAAGAAAAGGATATAGATTGTTTCTTTGAATCCTTATATGAAAGGAAGGATGATAGCTTGGCTGTCCCAACCTGTATATCGTCGGGGGTGAAAAAATTTAGAGCAAACGGAAGAGGGACAGTTTGTGGAAGATTCTTTCTTGGAACAGCAGAGAGGATACCGGATGGTGAGCTGATCGATACAACTGGTGCTGGAGATGCATTTATTGGTGCTATTCTTTATGCAATCTGCACAAACATGGAACCAGAGAAAATGTTACCATTTGCTGCTCAAGTGGCAGCTGCCAAGTGTAGGGCTTTGGGAGCTAGAACTGGTCTTCCATATCTGACAGATCCACGCCTAGCAGCCTATTTATGCTAG 1215 0.4609 MATMWNSLCVANGTLFNSSSPLLPLRFNSNSNLRFRRATITSMCVPENDVVVIGYGMTTVDFLATVDSFPKPDDKVRTTSFKVQGGGNAGNALTCAARLGLKPKLISKVGDDSQGHAILNELQRDAVDTSFVLVSKGGSSAFSYILIDNQTKTRTSIYTPAHPPMMPDDQSQSTLLSAFNEARLVYFDGLTTDTALFIAQEATRNKIPILVEAESPKEGLDELLKLADFAVCSARFPKAWTHASSIPSALVSMLLRLPNIKFVIVTLGEDGCLMLERSANEDADTEEKDIDCFFESLYERKDDSLAVPTCISSGVKKFRANGRGTVCGRFFLGTAERIPDGELIDTTGAGDAFIGAILYAICTNMEPEKMLPFAAQVAAAKCRALGARTGLPYLTDPRLAAYLC 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00039 404 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 33 403 - -
Adu06g00039 404 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 345 358 IPR002173 GO:0016773
Adu06g00039 404 SUPERFAMILY Ribokinase-like 49 395 IPR029056 -
Adu06g00039 404 Gene3D - 50 389 IPR029056 -
Adu06g00039 404 PRINTS Ribokinase signature 54 75 IPR002139 GO:0016301
Adu06g00039 404 PRINTS Ribokinase signature 81 100 IPR002139 GO:0016301
Adu06g00039 404 PRINTS Ribokinase signature 263 274 IPR002139 GO:0016301
Adu06g00039 404 Pfam pfkB family carbohydrate kinase 49 280 IPR011611 -
Adu06g00039 404 Pfam pfkB family carbohydrate kinase 336 392 IPR011611 -
Adu06g00039 404 CDD ribokinase_group_B 51 393 - -
Adu06g00039 404 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 33 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00039 Adu-Chr6 560042 563055 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00039 - - gmx:100792838 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00039 06 560042 563055 Adu06g00039 06 560042 563055 ECH
Adu06g00039 06 560042 563055 Adu02g01094 02 21461404 21467091 PCT