Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01094 ATGTCCAACTCTCTCCTTCTTCTTCCTCTTCCTCCTTCTTCCTCTTCTTATTCTCAACCCCATTCACCTCTCACTCTCACTTTCTTTAATTCACGGAGGAAGAGACGCCCTTGCAGATATTCCAGAGCGACAATGTGCTCCTCTCATAATTCCCACCCCCCAAACGACGTCGTTGTTGGGTGTGGAGCGGCGTCGGTGGATTTCTTGGCTACCGTTGCTTCTTACCCTAACCCTGATGACAAAATCAGAAGCATCAACTTGAAGGTTCAAGGAGGTGGAAATGCAGGCAATGCTTTAACTTGTGTTGCTAGATTGGGCCTCAAGCCAAGGATCATCTCCAAAGTAGCAGATGATAGTCAAGGCAGGAGCATACTAGATGAGTTACACGCTGATGGTGTAGATGCATCCTTTATTGTGGTGTCTGAGGAGGGAACTTCACCATTTACATATATTATTGTGGACAACGAAACGAAGACCCGTACTTGCATACATACCCCAGGATATCCTCCAATGATACCACAGGATCTTTCTGAATCAAGTCTGTTAACTGCATTGAATGGAGCAAGCATTGCTTACTTTGATGGGAGGTTATATGAAACTGCTCTTGTTGTTGCCCAAGAGGCAGTTAGGAAGAATATACCCATCTTAGTTGATGCAGAAAGGCCAAGGGAAGGGTTGGATGATCTCCTGAAATTTGCTAATTATGTTGTATGCTCAGCAAAGTTTCCACTAGCATGGACAGGAGCATCAACTTTTCCACAAGCACTTGTTTCTATTCTCTTAAGATTGCCCAACATCAGATTTGTGATTGTGACCTTGGGAAAAGATGGTTGCATAATGCTCGAGAGAAATCTTGATGCCTCTTCCACAGAGGAAGTGGATATAGACAGCTTAGTGGAGTCACTGAAGACGACAACGAATGAGAGTGTATTACACCCAACCTGTATATCATCGTCAGTGGCAACACTGAAGGCAGAAGGGATAGGAACAGTCAATGGGAGGATATATGTGGGAACAGCCGAGAGCATTCCTCCTTTGGAGCTTATTGACACCACTGGTGCCGGGGATGCATTTATTGGAGCTGTGATATATGCTATCTGTGCCAACTTTTCGCCAGAGACAATGCTTTCCTTTGCTGCTAATGTGGCAGCTGCCAAGTGTCGAGATTTAGGAGCTCGCAGTGGTCTTCCATATCGTGCTGACCCACGCATAGCTTCCTTCATGCAGTAG 1230 0.4553 MSNSLLLLPLPPSSSSYSQPHSPLTLTFFNSRRKRRPCRYSRATMCSSHNSHPPNDVVVGCGAASVDFLATVASYPNPDDKIRSINLKVQGGGNAGNALTCVARLGLKPRIISKVADDSQGRSILDELHADGVDASFIVVSEEGTSPFTYIIVDNETKTRTCIHTPGYPPMIPQDLSESSLLTALNGASIAYFDGRLYETALVVAQEAVRKNIPILVDAERPREGLDDLLKFANYVVCSAKFPLAWTGASTFPQALVSILLRLPNIRFVIVTLGKDGCIMLERNLDASSTEEVDIDSLVESLKTTTNESVLHPTCISSSVATLKAEGIGTVNGRIYVGTAESIPPLELIDTTGAGDAFIGAVIYAICANFSPETMLSFAANVAAAKCRDLGARSGLPYRADPRIASFMQ 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01094 409 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 350 363 IPR002173 GO:0016773
Adu02g01094 409 PRINTS Ribokinase signature 60 81 IPR002139 GO:0016301
Adu02g01094 409 PRINTS Ribokinase signature 87 106 IPR002139 GO:0016301
Adu02g01094 409 PRINTS Ribokinase signature 269 280 IPR002139 GO:0016301
Adu02g01094 409 SUPERFAMILY Ribokinase-like 58 401 IPR029056 -
Adu02g01094 409 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 46 408 - -
Adu02g01094 409 CDD ribokinase_group_B 57 398 - -
Adu02g01094 409 Gene3D - 57 394 IPR029056 -
Adu02g01094 409 Pfam pfkB family carbohydrate kinase 322 397 IPR011611 -
Adu02g01094 409 Pfam pfkB family carbohydrate kinase 61 283 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01094 Adu-Chr2 21461404 21467091 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01094 - - gmx:100802550 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00039 06 560042 563055 Adu02g01094 02 21461404 21467091 PCT