Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01726 ATGATAATGGGAACCTTCACCACCATAGGCCCACTCTTCCACCTTTGCGGCGGACAACATAATCTTCCAATTCAACAACGATCTTCCAATCACCACCACGAATTCAAACCCTTCTTCACTTGCTTTTCCACCAATAACAACAACAATGCATTTTCTTCCACCACCACCTTTTTCCACCGCCATAGGTTTCTTTCTCATGTGGTTGCTGCTTCTGAAATCGGCACGCCTATCGTGGAATCCTCCCCTCATCAATGCTCTGATGATCTGCTTTTCACCAAGATTTTCCCAATCAAGAGAACGCAAATGATGGAGGGAATGATTTTCGTGAGATTAGATCAGAGTAAGGAATTGAGGAATTGGGAGCTTACAGTGGGTTGCAATCTACCTGGAAAATGGATTCTTCATTGGGGAGTTTCCTATGTTGATGACATTGGGAGGGAGTGGGATAAACCTCCTTGTGATATGATACCGCCTGGATCTGTTACTATAAAGGACTATGCAATAGAGACACCCCTGAAAAAGTCATCAATATCTGCTGATGAAGGAGATACATTTTATGAAGTCAAGATTGATCTTAAGCCCGACAGCAAAATTTCCACAATTAATTTTGTTCTCAAGGATGGCGAAAATGGAGCTTGGCATCAATATAAGGGAAGAGATTTCAAAGTTCCTTTGCCCAAATACCTTAAGACACCTAAAAGGGGCTTTAGTTTATGGCCAGGAGGTTTGACAAAGATATCTAACATTCTCCTGAAGTCAATAACAACAGTTCACAATGATCAAGATAAAAGCAGTGAGCTAATTAATCCAAAACAGGAAAATGGTCAACTAGAAGGTTTCTGTATAGAAGTGCCTATCACAAAGGAGATTGATTTCAATAACTCTGTTACTGTCTCTGTTAAAAAGTGTTATCAGTCTGAGACATTAAAAAATGTCCTATATTTAGAAACTGACCTACCTGGAGATATTGTACTTCACTGGGGACTTTGCAGGGGCAATTCAAGAAGGTGGGAAGTTCCACCTGGTCCTCATCCACCAGGAACAGTACCGTATAAAGACAAAGCTTTGAGATCTCAACTGCAGGCAGGAGACAGTACAAAAGGATCTTCTCTACAAATCACTTTAGGCGAAGGGTTTTCAGGATTTGCTTTTGTTCTTAAGCAAAATGAAACTTGGTTCAAATGCATGGGAAATGACTTTTACGTCTCTCTCTTGGATTCTAATAGCATTCATAAAGAGGACCAACCAGAAGGTGTGGAGAGGGAAGTGACCAAGGGGACAAGTCAAGAAGCTTCTTTCCTTTCATTTACTGATGGAATATTCGGCGAAATAAGGAATTTGGTGACAGACATTTCCGCTAATAAGAACAGAAAGATAAAATCGAAAGAGCCACAAGAAAGCATTCTTCAAGAAATTGAAAGACTTGCTGCTGAAGCCTATAATATGTTCAAAAGCTCGGTTTCAACTTTCTCAGATGTAACTTCTACACTAGAGCCTGAGGCCACTGTTGTGGAGCCTGAGGCCGCTGTTGTGGAACCTGAACCTGCTGTTGGATCAAGAATATCGACTCTAGTTCCAAAAGTATGTTCTGCAGAAGGCACGGGATATGAAATATTATGCCAAGGGTTTAACTGGGAATCTCATAAATCTGGAAGATGGTATGTGGAGCTTAAGGATAAGGCTTCAGAGCTAGCATCACTTGGTTTTACTGTAGTTTGGTTACCGCCGTGCACTGAGTCTGTTTCACCTGAAGGATACATGCCAAGGGATTTATATAACTTAAATTCAAGATACGGAAACATTGATGAACTGAAGGATTTGGTGAAAAAATTTCATGAACTTGGAATAAAAACTTTAGGAGATGCTGTTTTAAATCACCGTTGTGCTCATTATCAGAATCCTAACGGTGTTTGGAACTTATTTGGAGGGCGTCTCAACTGGGATGAACGTGCAATTGTTGCTGATGATCCTCATTTTCAGGGTAGGGGAAACAAGAGTAGTGGAGAGAATTTTGATGCTGCACCAAATATTGATCATTCACAGGAATTTGTGAGAAAGGATATTATAGAATGGTTATGCTGGTTGAGAAAAGAAGTTGGATATGATGGATGGAGGCTTGACTTTGCCAGAGGATTTTGGGGTGGCTATGTAAAGGACTACATTCAGGCAAGTGACCCTTATTTTGCTGTAGGAGAGTTTTGGGATTCCCTGAGTTACACAGATGGTGAATTGGATCATAATCAAGATGCTCATAGGCAGAGGATAGTTGATTGGATCAATGCTACCAATGGCACTGCTGGTGCATTTGATGTTACAACCAAAGGGATTCTTCACTCTGCATTTGAAAGATGTGAATACTGGCGATTGTCTGATAGTGGTGGAAATCCACCAGGAGTTATGGGGTGGTGGCCATCTCATGCTGTTACCTTTATTGAAAATCATGACACTGGTTCCACCCAGGGTCATTGGAGATTTCCAAGTGGAAAAGAAATGGAGGGATATGCTTACATTCTTACTCACCCTGGAACTCCATCAGTGTTCTTGGACCACATTTTCTCTCACAATAAAACAGAAGTAGGAACACTTATATCTATCAGGACTAGGAACAAGATCCACTGCAGGAGTGTGGTTCAGATTGTTAAGGCAGAATGGGATGTTTATGCATCTATCATTGATGAAAAAATTGCCATGAAGATTGGACCTGGCCACTTTGAACCCCCTGCTGGCTCCCAAAACTGGTCCTTAGCTATTGCGGGAAGAGACTATAAAATTTGGGAGGCAAAATAA 2787 0.4116 MIMGTFTTIGPLFHLCGGQHNLPIQQRSSNHHHEFKPFFTCFSTNNNNNAFSSTTTFFHRHRFLSHVVAASEIGTPIVESSPHQCSDDLLFTKIFPIKRTQMMEGMIFVRLDQSKELRNWELTVGCNLPGKWILHWGVSYVDDIGREWDKPPCDMIPPGSVTIKDYAIETPLKKSSISADEGDTFYEVKIDLKPDSKISTINFVLKDGENGAWHQYKGRDFKVPLPKYLKTPKRGFSLWPGGLTKISNILLKSITTVHNDQDKSSELINPKQENGQLEGFCIEVPITKEIDFNNSVTVSVKKCYQSETLKNVLYLETDLPGDIVLHWGLCRGNSRRWEVPPGPHPPGTVPYKDKALRSQLQAGDSTKGSSLQITLGEGFSGFAFVLKQNETWFKCMGNDFYVSLLDSNSIHKEDQPEGVEREVTKGTSQEASFLSFTDGIFGEIRNLVTDISANKNRKIKSKEPQESILQEIERLAAEAYNMFKSSVSTFSDVTSTLEPEATVVEPEAAVVEPEPAVGSRISTLVPKVCSAEGTGYEILCQGFNWESHKSGRWYVELKDKASELASLGFTVVWLPPCTESVSPEGYMPRDLYNLNSRYGNIDELKDLVKKFHELGIKTLGDAVLNHRCAHYQNPNGVWNLFGGRLNWDERAIVADDPHFQGRGNKSSGENFDAAPNIDHSQEFVRKDIIEWLCWLRKEVGYDGWRLDFARGFWGGYVKDYIQASDPYFAVGEFWDSLSYTDGELDHNQDAHRQRIVDWINATNGTAGAFDVTTKGILHSAFERCEYWRLSDSGGNPPGVMGWWPSHAVTFIENHDTGSTQGHWRFPSGKEMEGYAYILTHPGTPSVFLDHIFSHNKTEVGTLISIRTRNKIHCRSVVQIVKAEWDVYASIIDEKIAMKIGPGHFEPPAGSQNWSLAIAGRDYKIWEAK 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01726 928 SUPERFAMILY (Trans)glycosidases 536 853 IPR017853 -
Adu05g01726 928 SMART alpha-amyl_c2 867 927 IPR012850 GO:0004556|GO:0005509|GO:0005975
Adu05g01726 928 SUPERFAMILY Glycosyl hydrolase domain 871 926 - -
Adu05g01726 928 PANTHER ALPHA-AMYLASE 92 927 - -
Adu05g01726 928 Pfam Alpha amylase, catalytic domain 564 759 IPR006047 GO:0005975
Adu05g01726 928 Pfam Alpha-amylase C-terminal beta-sheet domain 868 926 IPR012850 GO:0004556|GO:0005509|GO:0005975
Adu05g01726 928 Gene3D Glycosidases 536 870 - -
Adu05g01726 928 SMART aamy 537 872 IPR006047 GO:0005975
Adu05g01726 928 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 92 927 - -
Adu05g01726 928 CDD AmyAc_arch_bac_plant_AmyA 538 877 - -
Adu05g01726 928 Gene3D - 871 927 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01726 Adu-Chr5 37923651 37931741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01726 67 926 Glycoside Hydrolase AT1G69830 62.284 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01726 K01176 - gmx:100788193 1279.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01726 05 37923651 37931741 Adu05g01726 05 37923651 37931741 ECH
Adu03g03857 03 127368505 127380243 Adu05g01726 05 37923651 37931741 PCT