Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01617 ATGGCTCTGTCACGCATAGCATCATCATCTCATGCATCCACCCTCCTTAAACCCCTCTCCGCCGCCTTATCCATCCGCCGCCTTATCTCCTCCGACTCCACCGTTCCCCTCACCATCGAAACCTCTCTTCCATTCATCTCCCATAAATGCGACGCGCCCCCACGCGCCGTCGACACCTCCGCCTCGGAGCTCTTCTCCTTCTTCCGGGACATGGCCACCATGCGCCGCATGGAGATCGCCGCCGACTCACTCTACAAGGCCAAGCTCATCCGCGGCTTCTGCCACCTTTACGACGGTCAGGAGGCTGTGGCCATCGGCATGGAGGCCGCCATCACCAAGAAAGACGCCATCATCACCGCCTACCGCGACCACTGCACCTTTATTGGCCGCGGAGGCACGCTCCTCGAGGTCTTCGGCGAGCTCATGGGCCGCATCTGCGGCGGCTCCAAGGGCAAGGGCGGCTCCATGCACTTCTACCGCAAGCAGACCAATTTTTTCGGTGGCCATGGCATCGTCGGAGCTCAGATTCCGCTTGGATGTGGGTTGGCGTTTGCTCAGAGGTACTCCAAGGAAGAGAATGTGACATTTACCTTGTATGGTGATGGTGCTGCCAACCAGGGCCAATTGTTTGAGGCGCTTAATATGGCAGCGCTTTGGGACCTACCTGCGATCTTGGTCTGCGAGAATAACCATTATGGGATGGGAACAGCAGAGTGGAGGGCTGCTAAAAACCCTGCTTATTACAAGCGTGGAGATTATGTTCCTGGGTTGAAGGTTGATGGCATGGATGTTCTTGCTGTGAAACAAGCTTGCAAGTTTGCAAAGGAGAATGCTTTGAAAAATGGGCCCCTTATTCTTGAAATGGACACCTATAGATACCACGGGCACTCTATGTCTGATCCTGGTAGCACATACCGTACACGTGATGAGATTTCCGGTGTGAGGCAGGTTTGTCACACTACCGAGCAAGACATATAA 978 0.5491 MALSRIASSSHASTLLKPLSAALSIRRLISSDSTVPLTIETSLPFISHKCDAPPRAVDTSASELFSFFRDMATMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRDHCTFIGRGGTLLEVFGELMGRICGGSKGKGGSMHFYRKQTNFFGGHGIVGAQIPLGCGLAFAQRYSKEENVTFTLYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKNPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKENALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQVCHTTEQDI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01617 325 Gene3D - 24 322 - -
Adu05g01617 325 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 1 319 - -
Adu05g01617 325 CDD TPP_E1_PDC_ADC_BCADC 67 312 - -
Adu05g01617 325 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 54 315 IPR029061 -
Adu05g01617 325 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 1 319 - -
Adu05g01617 325 Pfam Dehydrogenase E1 component 69 316 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01617 Adu-Chr5 29887420 29890504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01617 1 323 Acyl Lipid Metabolism Gene Families AT1G24180 78.769 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01617 K00161 - fve:101298701 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01617 05 29887420 29890504 Adu05g01617 05 29887420 29890504 ECH
Adu05g01617 05 29887420 29890504 Adu03g03822 03 126897775 126902341 PCT