Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03822 ATGGCTCTCTCGCGTTCCGGATCCAATCTCCTGAAACCGATCTCACCTTTCTTCTCCTGCGCCCGCGCCCCATCGATTCTCAGCCGTTCGATCTCTTCCTCCAATGATTCCATCACCGTCGAGACCTCAATCCCCTTCACCGCTCACAACTGCGAACCTCCGTCGCGCTCCGTCACCACCTCCGCCGCCGAGCTCCGCTCTTTCTTCCGCGACATGGCCCTCATGCGCCGAATGGAGATCGCCGCCGACAGCCTCTACAAGGCTAAGCTCATCCGCGGCTTCTGCCACCTTTACGACGGTCAGGAGGCTGTCGCCGTCGGAATGGAGGCCGCCATCACCAGGAAGGATTGCATCATCACCGCGTACCGCGACCACTGCACCTTCCTCAGCCGCGGTGGAAACCTAGTCGAGGTTTTCGCCGAGCTCATGGGACGCCGCGCCGGAATGTCCAACGGCAAGGGCGGATCCATGCACTTTTACCGCAAGGAAGGCGGATTCTACGGCGGCCACGGCATCGTCGGAGCTCAGGTTCCGCTCGGTTGCGGATTGGCGTTCGCACAGAAGTACTCGAAGGATGAGAACGTGACTTTTGCTATGTATGGTGATGGTGCTGCTAATCAGGGACAGTTGTTTGAGGCTCTTAACATTGCTGCGCTTTGGGATTTGCCTGCAATTTTGGTCTGCGAGAATAACCATTATGGAATGGGAACTGCTGAGTGGAGAGCTGCAAAGAGTCCTGCTTATTACAAGCGTGGGGATTATGTTCCCGGATTGAAGGTAGATGGCATGGATGCTTTTGCTGTGAAACAAGCATGCAAATTTGCAAAGGAGCATGCTTTAAAGAATGGACCAATTATTCTTGAAATGGACACATACAGGTATCATGGTCACTCCATGTCTGACCCTGGTAGCACATACCGTACACGTGATGAGATTAGTGGTGTTAGACAGGAGCGTGATCCAATTGAGAGAATAAGAAAGTTGTTGCTGTCTCATGAGATTTCTACTGAGACAGAGCTAAAGGACATCGAGAAGGAGGTCAGAAAAGAAGTTGACAACGCCATTTCAAAAGCAAAGGAGAGTGAGATGCCAGATCCATCTGAACTATTTACTAATGTGTACGTTAAGGGTTTTGGTGTTGAGGCATATGGTGCTGATAGGAAAGAACTTAGAGCTACTCTGCCCTAA 1188 0.5202 MALSRSGSNLLKPISPFFSCARAPSILSRSISSSNDSITVETSIPFTAHNCEPPSRSVTTSAAELRSFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRKDCIITAYRDHCTFLSRGGNLVEVFAELMGRRAGMSNGKGGSMHFYRKEGGFYGGHGIVGAQVPLGCGLAFAQKYSKDENVTFAMYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDAFAVKQACKFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLLLSHEISTETELKDIEKEVRKEVDNAISKAKESEMPDPSELFTNVYVKGFGVEAYGADRKELRATLP 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03822 395 CDD TPP_E1_PDC_ADC_BCADC 68 358 - -
Adu03g03822 395 Pfam Dehydrogenase E1 component 71 366 IPR001017 GO:0016624
Adu03g03822 395 MobiDBLite consensus disorder prediction 298 317 - -
Adu03g03822 395 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 64 375 IPR017597 GO:0004739|GO:0006086|GO:0043231
Adu03g03822 395 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 4 395 - -
Adu03g03822 395 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 4 395 - -
Adu03g03822 395 Gene3D - 23 389 - -
Adu03g03822 395 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 55 376 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03822 Adu-Chr3 126897775 126902341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03822 1 395 Acyl Lipid Metabolism Gene Families AT1G24180 77.638 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03822 K00161 - gmx:100813933 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03822 03 126897775 126902341 Adu03g03822 03 126897775 126902341 ECH
Adu05g01617 05 29887420 29890504 Adu03g03822 03 126897775 126902341 PCT