Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01060 ATGGTGAATCGACGCTTCTCTCGGGTGGCCACCAGCGATGACGACGAAGACGATCGTCCCAAGCAGCTGCGCCAGAGGAAGCGCATGAAGCTTCTCGAGGAGGAGGAGGAAGAAGAAGAAGATGAGGAAGAGGAAGAGGAAGATGAAGATGATTACGACAGCGACGATGACAACACCTCCCAACATAGTAAGAAGAAGAATAAGAAGAAGAAGAACAATGAGGGCAGAGGGAAAGACAAGGCCAAGGAAGCAGAAAAGGCGGCGGAGGAGTCACCTCAGGAGGACGCTAAGCCCCTCGGCGATCCCATTAGGGTTTCTGGAAAGGGAAGAGGTCGCAAGAAGCATTACCAATCCTTCGAATTCGATGGCAATCAATATACACTCGAGGACCCTGTACTTCTCGTGCCCGAGGAAACAGACCAAAAGCCCTATGTTGCAATTATTAAGGACATCACACTTACCTGCAATGGCAGCATGATGGTGACAGGGCAGTGGTTTTATCGTCCAGAAGAAGCATCACAACAGGAAGGCATAAGTGTGTGGCTAACGGACAAGGACTATGAGGATGTTAAACAGCAAGAACTTGATGAGCTAGTACAGAAAACTCTACAACGTATCGGTAAACTGCTTGACATCGAGCCTTCAGAAGCATCTGCTGATCAGGAAGATTTGACAAAAAATAAAAGGAACACAAGGACAAAGAGTACTTCACCTCGTGATGTTTCCGGGAAGGATGACGGAAATCCAAAGGGCGACCAACTTCTGAAGCCTGAAACACAAGGGAATAGTGTAAACAATGCCTCAGAGTATTATCGTATATTAGTGAAGTTTGATGTGCTAACCGGAAACACTCATCGTGATAAATGGTTGGAGAAGTTGCTTGGGCACGTTCATTACATGTGTAAATCTGATGACAGCATTAAAAGGGATGACAAAAGATTGGAGAATGTCAATTCTGATGAAATTAACAATAAAAATCCAGAATCAGCAAATGACCTTCAAGACACGGGCCAGAAGAGTTCCAAGTCTTTTGTCTGGCCAGATACTGCTGTTACAGCCATAGTTGCACTTGAAAAAGCTTCAAATGACGCCTTTTCATCGGATTTCCAGAAGTACAATAAAAAGATACGGCAATTAGATTATAATATCCATAATAATGCACTGCTAGCACGCCGCTTATTAAATGGAGAGCTGGAACCGGCAAAAATAGTAAATATGGCACCAAATGAATTGAAGGAGGCTATTACTGCTGAAGAAAAGGCCAAGGAAGAACCTGATGAATCACAACTCATACAGATGACAGATGCCCGGTGCCAAAGATGTATGGAATTGAAGGTGGGCTTGAGGGAAATTATCCATGCTGGACACGGTGACAGATATCAGCTTGAATGTGTTGCCTGTGGAAATTCCTGGTATGCCTCCCGGGATGAGGCTTCTTTGCTGACAATAGATGCACCAGTTTCAAAGAAAAGTCTAATGACAGCACCATCGAGCACTTCTAAAATTGAAGATGAAGAGAAGAAGCTGAAAGGCCCCCATGAGTCTGAAAAGTTAGCCCCTGAAAAAAAGAAAGCAAGTGAAGCTTGTATACCTGAATCGGATGCCCAGAAATCATTTGGCAAGTCCGGGAATGATGACAATATTGAGACAACAAAACATGTTGATTAG 1668 0.443 MVNRRFSRVATSDDDEDDRPKQLRQRKRMKLLEEEEEEEEDEEEEEEDEDDYDSDDDNTSQHSKKKNKKKKNNEGRGKDKAKEAEKAAEESPQEDAKPLGDPIRVSGKGRGRKKHYQSFEFDGNQYTLEDPVLLVPEETDQKPYVAIIKDITLTCNGSMMVTGQWFYRPEEASQQEGISVWLTDKDYEDVKQQELDELVQKTLQRIGKLLDIEPSEASADQEDLTKNKRNTRTKSTSPRDVSGKDDGNPKGDQLLKPETQGNSVNNASEYYRILVKFDVLTGNTHRDKWLEKLLGHVHYMCKSDDSIKRDDKRLENVNSDEINNKNPESANDLQDTGQKSSKSFVWPDTAVTAIVALEKASNDAFSSDFQKYNKKIRQLDYNIHNNALLARRLLNGELEPAKIVNMAPNELKEAITAEEKAKEEPDESQLIQMTDARCQRCMELKVGLREIIHAGHGDRYQLECVACGNSWYASRDEASLLTIDAPVSKKSLMTAPSSTSKIEDEEKKLKGPHESEKLAPEKKKASEACIPESDAQKSFGKSGNDDNIETTKHVD 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01060 555 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 179 - -
Adu05g01060 555 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 182 552 - -
Adu05g01060 555 ProSiteProfiles BAH domain profile. 124 258 IPR001025 GO:0003682
Adu05g01060 555 MobiDBLite consensus disorder prediction 34 56 - -
Adu05g01060 555 SUPERFAMILY Elongation factor TFIIS domain 2 281 412 IPR036575 GO:0006351
Adu05g01060 555 ProSiteProfiles TFIIS central domain profile. 285 439 IPR003618 GO:0006351
Adu05g01060 555 MobiDBLite consensus disorder prediction 500 530 - -
Adu05g01060 555 Gene3D - 274 413 IPR036575 GO:0006351
Adu05g01060 555 MobiDBLite consensus disorder prediction 74 97 - -
Adu05g01060 555 SMART mid_6 320 421 IPR003618 GO:0006351
Adu05g01060 555 MobiDBLite consensus disorder prediction 1 114 - -
Adu05g01060 555 MobiDBLite consensus disorder prediction 318 341 - -
Adu05g01060 555 MobiDBLite consensus disorder prediction 492 555 - -
Adu05g01060 555 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 179 - -
Adu05g01060 555 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 182 552 - -
Adu05g01060 555 MobiDBLite consensus disorder prediction 219 252 - -
Adu05g01060 555 Pfam Transcription factor S-II (TFIIS), central domain 281 427 IPR003618 GO:0006351
Adu05g01060 555 Coils Coil 22 52 - -
Adu05g01060 555 MobiDBLite consensus disorder prediction 320 341 - -
Adu05g01060 555 MobiDBLite consensus disorder prediction 8 33 - -
Adu05g01060 555 Gene3D - 108 195 IPR043151 -
Adu05g01060 555 MobiDBLite consensus disorder prediction 214 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01060 Adu-Chr5 14237862 14241353 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01060 - - cam:101495294 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01060 05 14237862 14241353 Adu03g02798 03 104802964 104807360 PCT