Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02798 ATGGGGAATCGACGGTTTACTCAGGTGGCAATGAGCGACGACGAGGACGAAGAACCGCCACGTCCCAAGCAGCAGCCAGCTTCCTCTTGTTCTCCACCGTCGAAGCAGCAGCAGCAGGAGAAGAGGAAGCGCATGAAGCTGCAGGAGGAAGAAGACGAGGATGAGGAGAAGGAGGAGCAACTGCAGCAGGAGGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGCGGAAGAGGAAGAAGAGGAAGGGGAAGGAGAAGGATAAGCATGTGGAAGAAGAGGAACCCCCTCAGGAAGACGCCAAGCCCATTGGCGATCCCATTAGGGTTTCTGGAAAGGGGAGAGGTAGGAAGAAGCATTTCGAGTCATTCGAGTTTGATGGAAACCAGTACACTCTGGAGGACCCTGTACTTCTTGTTCCTGAGGATAAGGACCAGAAACCCTATGTGGCTATTATTAAAGATATTACACAGTCCCTAAATGGCAGCATGATGGTTACCGGGCAGTGGTTTTACCGTCCTGAAGAAGCAGAAAGGAAAGGTGGTGGCAGTTGGCAATCACGTGATACAAGGGAACTCTTTTATAGTTTCCACCGTGATGAGGTTCCAGCCGAATCTGTTATGCATAAGTGCGTTGTGCATTTTGTTCCCATACACAAACAGCTTCCGAATCGTAAGCAGCATCCTGGCTTCATTGTACAAAAGGTGTATGACACTGTAGAAAGGAAACTCTGGAAGCTAACTGATAAGGACTATGAAGACAACAAACAGCAAGAGATTGATGAGCTTGTTCAGAAAACCCTTAAGCGGATGGGTGAATTGCCTGACATCGAGCCCGAAGAAGCTCCTTCTGCTGATCAGGAAGATGTTATGAAAAGTAAAAGGATTTTAAGGAAGAAAGGCATTTCGCCTCTTGATGTTTCACGGGAGGAGGAATCAGGTCGTAAGGGTGACCAACATCTGAAACCTGAAACACCCGGGAGTTGTGTAAGTAATTCCTCTGAGCATTATCACATATTAGTGGATTGGAATGTGTTAACAGGGGATACCCATCGTGACAAAGTCCTGGAGAAGTTGCTTCAAAGTGTTCAATACGTGTTTAATTCGGATGACGGCATAAAGAAGAAAGAGAAAGGAAGTGAAAATTCTGATCCAGGTTATAATGGAAGCAATAATAGAACTTCCCAATCACCAAATGAATGTCAAGATAAGGTTCAGAAGAGTTCCAAGTCTTTGGTCTGGCCGGATGCTGCGGTAACAGCTGTAGTTGCTTTGGAAAAAGTTTCACATGATACACTTTCATCGGATTATCAGAAGTATAACCAAAAGCTACGGCAATTAGTTTTTAATCTGAAGAACAACACATTGCTAGCATGTCGTCTGTTAAATGGAGAATTGGAACCTTCAAAAGTATTTAACATGACACCCAATGAATTGAAGGAGGGTTTGACTGCTGATGAGATATCCAAGAAAGAGCCTGATGAGTCACAGCACATGCAGATGACGGATGCGCGCTGCAGAAGATGCAGAGAATGCAAGGTGGGTTTGAGGGATATCATCCATGCAGGACATGGTGACAGATATCAGCTGGAATGTATTGCTTGCGGTAACTCATGGTATGCCTCACGTGATGAGGTATCAACACTGACCATAGATGCTTCTGATTCTAAACGGAGTAGTGTAGGGACAGCACCGTGGGCCACTGCTAAATTCGAGAGTGTTGAGAAGAAGCTGGTGAGCCCTCGTGAACCTGAAAGATCTGGTAATGACATCTTCAAGAAAACAAGCGAAGCATATATGCCTGTATTGGACTCCCAAAAATCATTTGGCAAGTCCAGGAAAGATGACAACACTGAAGCTACAAAACAAGCTGACTAG 1872 0.4562 MGNRRFTQVAMSDDEDEEPPRPKQQPASSCSPPSKQQQQEKRKRMKLQEEEDEDEEKEEQLQQEEEEEEEEEEERKRKKRKGKEKDKHVEEEEPPQEDAKPIGDPIRVSGKGRGRKKHFESFEFDGNQYTLEDPVLLVPEDKDQKPYVAIIKDITQSLNGSMMVTGQWFYRPEEAERKGGGSWQSRDTRELFYSFHRDEVPAESVMHKCVVHFVPIHKQLPNRKQHPGFIVQKVYDTVERKLWKLTDKDYEDNKQQEIDELVQKTLKRMGELPDIEPEEAPSADQEDVMKSKRILRKKGISPLDVSREEESGRKGDQHLKPETPGSCVSNSSEHYHILVDWNVLTGDTHRDKVLEKLLQSVQYVFNSDDGIKKKEKGSENSDPGYNGSNNRTSQSPNECQDKVQKSSKSLVWPDAAVTAVVALEKVSHDTLSSDYQKYNQKLRQLVFNLKNNTLLACRLLNGELEPSKVFNMTPNELKEGLTADEISKKEPDESQHMQMTDARCRRCRECKVGLRDIIHAGHGDRYQLECIACGNSWYASRDEVSTLTIDASDSKRSSVGTAPWATAKFESVEKKLVSPREPERSGNDIFKKTSEAYMPVLDSQKSFGKSRKDDNTEATKQAD 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02798 623 MobiDBLite consensus disorder prediction 575 623 - -
Adu03g02798 623 Pfam BAH domain 128 244 IPR001025 GO:0003682
Adu03g02798 623 MobiDBLite consensus disorder prediction 72 100 - -
Adu03g02798 623 MobiDBLite consensus disorder prediction 51 71 - -
Adu03g02798 623 Coils Coil 35 86 - -
Adu03g02798 623 MobiDBLite consensus disorder prediction 381 406 - -
Adu03g02798 623 MobiDBLite consensus disorder prediction 283 320 - -
Adu03g02798 623 Gene3D - 53 235 IPR043151 -
Adu03g02798 623 Pfam Transcription factor S-II (TFIIS), central domain 345 496 IPR003618 GO:0006351
Adu03g02798 623 MobiDBLite consensus disorder prediction 606 623 - -
Adu03g02798 623 SMART mid_6 347 487 IPR003618 GO:0006351
Adu03g02798 623 MobiDBLite consensus disorder prediction 1 114 - -
Adu03g02798 623 MobiDBLite consensus disorder prediction 575 590 - -
Adu03g02798 623 Gene3D - 388 479 IPR036575 GO:0006351
Adu03g02798 623 SUPERFAMILY Elongation factor TFIIS domain 2 343 478 IPR036575 GO:0006351
Adu03g02798 623 MobiDBLite consensus disorder prediction 371 406 - -
Adu03g02798 623 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 620 - -
Adu03g02798 623 SMART BAH_4 127 246 IPR001025 GO:0003682
Adu03g02798 623 CDD BAH_plant_3 109 255 - -
Adu03g02798 623 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 620 - -
Adu03g02798 623 MobiDBLite consensus disorder prediction 272 330 - -
Adu03g02798 623 ProSiteProfiles BAH domain profile. 127 246 IPR001025 GO:0003682
Adu03g02798 623 ProSiteProfiles TFIIS central domain profile. 349 505 IPR003618 GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02798 Adu-Chr3 104802964 104807360 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02798 - - aip:107630794 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02798 03 104802964 104807360 Adu03g02798 03 104802964 104807360 ECH
Adu05g01060 05 14237862 14241353 Adu03g02798 03 104802964 104807360 PCT