Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01045 ATGTCGCTGCAAGGAAAGCTGGACAGCTTCAAGAAGCAGCAGGCGAAGTGCCAGTCGACGCTGTCAAGCATCGCGGCGTCGAAGGCTGCCAATCAAAAACAGAAACAGAATCCTGCTCCGGCAGCAGCTTCTCCGGTGCCGGCAATTAAATTCTCAAATGACACAGAGAGGCTTCAACAGATCAACGGTATCCGCAAAGCCCCCGTTGGGGCTCAGATGAAGCGTGTCATTGAACTCCTCTATGAGACAAGGCAGGCTTTTACACCAGAACAGATAAATGAGGCTTGCTATGTGGATATGAGGGCAAACAAAGATGTTTTTGAGAATATGAGGAAAAACCCCAAAGTCAAATTTGATGGGGAACGATTCTCTTACAAGTCGAAGCATGATGTTAAGGACAAAAGTCAGTTGCTCTACCTGATTCGCAAGTTTCCGGAGGGCATTGCTGTTATTGACTTGAAGGATTCTTATCCAGCTGTGATGGAGGACTTGCAGGGTTTGAAAGCCGCAGGGCAGATTTGGCTGCTATCCAACTTTGATTCACAAGAAGACATTGCATATCCTAATGATCCCAGGGTACCCATTAAGGTTGATGATGACCTGAAACAGCTTTTTCGGGGGATTGAATTGCCTCGTGATATGCTTGACATAGAGAGGGATCTCCAAAAGAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCGGCGCAAATGCAAGGCATTACTCCCAAGGCCAAGCCCAAGGCTAAGAAGACCGAGATCAGCAAGAGGACTAAGCTCACCAATGCCCATCTTCCAGAGCTTTTCCAGAAATTGAAAGATTCCTGA 837 0.4731 MSLQGKLDSFKKQQAKCQSTLSSIAASKAANQKQKQNPAPAAASPVPAIKFSNDTERLQQINGIRKAPVGAQMKRVIELLYETRQAFTPEQINEACYVDMRANKDVFENMRKNPKVKFDGERFSYKSKHDVKDKSQLLYLIRKFPEGIAVIDLKDSYPAVMEDLQGLKAAGQIWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQLFRGIELPRDMLDIERDLQKNGMKPATNTAKRRSAAQMQGITPKAKPKAKKTEISKRTKLTNAHLPELFQKLKDS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01045 278 Pfam TFIIE beta subunit core domain 71 131 IPR003166 GO:0006367
Adu05g01045 278 Pfam TFA2 Winged helix domain 2 132 189 IPR040501 -
Adu05g01045 278 PANTHER BNAA02G21830D PROTEIN 1 276 - -
Adu05g01045 278 PIRSF TFIIE-beta 1 277 IPR016656 GO:0005673|GO:0006367
Adu05g01045 278 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 276 IPR016656 GO:0005673|GO:0006367
Adu05g01045 278 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 60 132 IPR003166 GO:0006367
Adu05g01045 278 MobiDBLite consensus disorder prediction 227 263 - -
Adu05g01045 278 MobiDBLite consensus disorder prediction 26 46 - -
Adu05g01045 278 MobiDBLite consensus disorder prediction 249 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01045 Adu-Chr5 14080077 14082632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01045 K03137 - cpap:110811575 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01045 05 14080077 14082632 Adu03g02833 03 106879493 106881964 PCT