Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02833 ATGGGGTTGCAAGAGAAGCTGGAGAAGTGTCAATCAACGGTATCGAGCATTGCAGCAAGCAAGCCTGCTGCAACCCAAAAGTCATCTTCAACCCCAACAGCAGCTGCACTTGCTGCTGCCTCAGCCAATGGAAGGAGCAACATAGCAGCCTCTGCTGTCAAATTCTCCAATGATACAGAGAGGCTTCAGCATATTAACAGCATACGCAAATCCCCTGTCGGTGCTCAGATGAAGCGTGTAATCCATCTCCTGTACGAGACCCGGCAGGCTTTGACGCCAGAGCAAATAAATGAAGCTTGCTATGTTGATATGAAGGCTAATAAAGATGTTTTTGACAATCTGAGGAAAAACCCGAAAGTAAATTATGATGGGCAATGTTTCTCTTACAAGTCAAAGCATAACCTTAAGGACAAAATTCAGCTTCTTCACCTGATACGTAAGTTTCCAGAGGGCATTGCCGTCATTGATCTAAAGGATTCTTACCCAACTGTGATGGAAGACATGCAGGCTTTGAAAGCTGTGAGGCAGATTTGGCTGCTATCGAATTTCGATTCACAGGAAGACATTGCGTACCCCAATGACCCCAGAGTGCCCATTAAGGTGGATGATGACCTTAAACAGCTCTTCCGTAATATCGAATTACCCCGCGATATGATAGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCTGCTACCAACACTGCAAAGAGGAGGAGTGCAGCACAAATTCAAGGCATCTCTCCCAAGCCAAAGGTTAAGAAATCTAGGCGAGAAATCAACAGCAGGACCAAGCTCACCAATGCCCATCTTCCAGAGCTTTTCCAGAAATTGATTAATTGA 846 0.4492 MGLQEKLEKCQSTVSSIAASKPAATQKSSSTPTAAALAAASANGRSNIAASAVKFSNDTERLQHINSIRKSPVGAQMKRVIHLLYETRQALTPEQINEACYVDMKANKDVFDNLRKNPKVNYDGQCFSYKSKHNLKDKIQLLHLIRKFPEGIAVIDLKDSYPTVMEDMQALKAVRQIWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQLFRNIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGISPKPKVKKSRREINSRTKLTNAHLPELFQKLIN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02833 281 PIRSF TFIIE-beta 2 278 IPR016656 GO:0005673|GO:0006367
Adu03g02833 281 Pfam TFIIE beta subunit core domain 75 134 IPR003166 GO:0006367
Adu03g02833 281 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 61 136 IPR003166 GO:0006367
Adu03g02833 281 PANTHER TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA 6 277 - -
Adu03g02833 281 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 6 277 IPR016656 GO:0005673|GO:0006367
Adu03g02833 281 MobiDBLite consensus disorder prediction 231 261 - -
Adu03g02833 281 Pfam TFA2 Winged helix domain 2 136 193 IPR040501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02833 Adu-Chr3 106879493 106881964 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02833 K03137 - gmx:100802433 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02833 03 106879493 106881964 Adu03g02833 03 106879493 106881964 ECH
Adu05g01045 05 14080077 14082632 Adu03g02833 03 106879493 106881964 PCT