Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00998 ATGGTTGCTGACCAATGGTACGACAAGAACGGCGTTTGGACCGGCTCCGCCACCATCTTACCCAACGGCAAAATCATCATGTTGTACACTGGTTCCACCAACGAGTCAGTGCAGGTTCAAAACCTTGCATACCCTGCTGATCCATCTGATCCCCTCCTCATCGATTGGGTCAAGTACCCTTCCAACCCTGTCTTGTTCCCTCCACCTGGCATTGGTGCAACTGACTTTCGTGACCCAACCACCGCTTGGCTTACCTCCGAAGGCAAGTGGCGTATCACCATTGGATCCAAGCTTAACAAAACTGGCATTGCTTTGGTTTATGACACCCTGGACTTCAAGACCTACGAGCAGATAGAGGGCTTCCTTCGTGCTGTTCCTACAACCGGCATGTGGGAGTGTGTTGACTTTTTCCCTGTTTCCAAGGAGGTTGAGAATGGCTTGAACACTTCTGTTAATGGGGCGGGTGTGAAGCATGTCATGAAGGTTAGTTTGGATGATGACAGGCATGATTACTATTCAATTGGCAGCTATGATGAGAAGAATGTCAAGTTCATACCAGATGATGTTGACAACGATGTTGGTGTTGGATTGAGGTATGATTATGGTGTGTTCTATGCGTCCAAAACTTTCTTTGATGATAGCAAGAGAAGGAGAGTGTTGTGGGGTTGGATTGGAGAGTCTGATGCTGAATATGCTGATGTTGCCAAAGGCTGGGCTTCACTTCAGGGTATTCCGAGAACAGTGACACTTGATACGAAAACAGGTAGCAACTTAATTCAATGGCCTGTTGAAGAGGTGGAGAGCTTGAGACTGAGAAGCGATGAGTTTAAGGATTTGAAGGCAAAGCCAGGATCCGTGGTCCCAATAGATGTTGGGACAGCTACACAGCTTGATATTGTAGCTGAATTTGAGATTGAAAAGGAAGAGTTGGAGAAGGCAACAAGCGAGTCTAATGTGGACTACTACAGTTGCGAGAGCAGCGGTGGAGCAGCACATCGTGGTGCCTTGGGACCTTTTGGTCTTTTGGTTCTTGCAGATGATGGGCTTTCCGAGTACACTCCTGTGTACTTCTATGTGATTAAAGGAAGTGATGGAAATCTCAAGACTTCATTCTGCTCCGATCAGTCAAGGTCGTCTGTGGCAAGCGATGTAGTAAAGAAAACATTTGGAAGCTTGGTTCCAGTACTTGAAGGTGAGAAGTTTTCTGTGAGGATATTGGTGGACCATTCAATAGTGGAAAGCTTTGCGCAAGGTGGAAGGACCACGGTGACATCAAGGGTGTACCCAACAAGGGCAATCTATGGAGCTGCTAGGTTGTTCTTCTTCAATAATGCAACTGCTGCTTCTGTTACTGCTTCACTCAAAGTTTGGCAGATGAATTCTGCATTCATAAGACCTTACAACCCTGACCAGACCAACTAA 1422 0.4662 MVADQWYDKNGVWTGSATILPNGKIIMLYTGSTNESVQVQNLAYPADPSDPLLIDWVKYPSNPVLFPPPGIGATDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTLDFKTYEQIEGFLRAVPTTGMWECVDFFPVSKEVENGLNTSVNGAGVKHVMKVSLDDDRHDYYSIGSYDEKNVKFIPDDVDNDVGVGLRYDYGVFYASKTFFDDSKRRRVLWGWIGESDAEYADVAKGWASLQGIPRTVTLDTKTGSNLIQWPVEEVESLRLRSDEFKDLKAKPGSVVPIDVGTATQLDIVAEFEIEKEELEKATSESNVDYYSCESSGGAAHRGALGPFGLLVLADDGLSEYTPVYFYVIKGSDGNLKTSFCSDQSRSSVASDVVKKTFGSLVPVLEGEKFSVRILVDHSIVESFAQGGRTTVTSRVYPTRAIYGAARLFFFNNATAASVTASLKVWQMNSAFIRPYNPDQTN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00998 473 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 262 IPR013148 -
Adu05g00998 473 Gene3D Glycosyl hydrolase domain; family 43 1 273 IPR023296 -
Adu05g00998 473 SUPERFAMILY Arabinanase/levansucrase/invertase 2 263 IPR023296 -
Adu05g00998 473 Gene3D - 274 459 - -
Adu05g00998 473 SMART glyco_32 1 419 IPR001362 GO:0004553|GO:0005975
Adu05g00998 473 Pfam Glycosyl hydrolases family 32 C terminal 265 458 IPR013189 -
Adu05g00998 473 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 1 468 - -
Adu05g00998 473 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 468 - -
Adu05g00998 473 SUPERFAMILY Concanavalin A-like lectins/glucanases 262 463 IPR013320 -
Adu05g00998 473 CDD GH32_Fruct1-like 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00998 Adu-Chr5 13158755 13161492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00998 1 468 Glycoside Hydrolase AT1G12240 69.831 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00998 K01193 - gmx:100798772 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00998 05 13158755 13161492 Adu05g00998 05 13158755 13161492 ECH
Adu05g00998 05 13158755 13161492 Adu01g01492 01 41297604 41304224 PCT