Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01492 ATGGGAGAAGAGAAGGGTTGGTCTGTGAACGTGCCCTTGTTGAACGGGGGAAATGAAGAAGGGTCTCGGCAACCGAGCAGAAGGGTTGTGATTGGGGCAGTGTGCGGGTTCTTGGTACTGATTTCGTTAGCGGCATTGATAGGATTTCACAATGCATATAGTGGGGAGACCTTGTATTGTGCGGTTCAAGGAACAACGCATGGACAGCCAATTCTTTCGCGAGGGGTGTCGGCCGGTGTATCGGAGAAGACCAATAGGCATTTGGGAGCAAAGCCATTCCCTGGCTGGAGCAACACCATGCTCTCGTGGCAGAGGACTGCCTTCCACTTCCAGCCCGATAAGAACTGGATGAACGATCCTAATGGACCTGTATACTACAAGGAATGGTATCACTTCTTCTACCAGTATAATCCAAACGATGCCGTTTGGGGTGACATAGTTTGGGGCCACGCAGTGTCAAGGGACATGATACATTGGCTTTACCTTCCAATCGCAATGGTTCCAGACCAATGGTACGATGCAAATGGTGTGTGGACCGGCTCAGCCACCATCTTATCCGATGGCCAACTCGTCATGCTCTACACCGGTTCGACCAACGAGTCGGTTCAAGTACAAAACCTGGCTTATCCGGCTGATCCTTCCGACCCTCTCCTTCTGAATTGGACCAAGTACGACAAAAACCCGGTTCTATCCCCTCCTCCGGGCATTCATTACCGCGACTTCCGCGATCCGACGACGGCCATGCTGACGTCGGAAGGCAAGTGGCGTATCAGCATTGGGTCCAAGATCAACAAAACCGGCATTGCGCTTATCTATGACACTGAGGATTTCAAAAATTTCGAGCTCAAGAATGGGTGGCTCCGGGCCGTGCAGGGAACCGGTATGTGGGAGTGCGTTGACTTTTATCCAGTGTCAAGCATCAATGATGTTGGATTGGATACCTCTGCCTATGGGGATGGTGTTAAGCATGTGGTGAAGGTGAGCTTGGATGATGATAGAAATGATTACTATGCAATTGGTTCTTATGATGAGAAGCTTGCAAGCTTCTTGCCTGATGATGTTAAGAATGATGTTGGTATTGGACTGAGGTATGACTATGGTAATTTCTATGCTTCCAAGACATTCTTTGATCCAAGTAAGCAAAGGAGAATCTTGTGGGGTTGGATTACAGAGTATGATAGCGAGTGTGTTGATAGAACCAAGAGCTGGGCATCACTTCAGGGCATTCCGAGGACAGTGAGACTTGATAGGAAGACATGGAGCAATTTGATTCAGTGGCCTGTTGAGGAGGTGAATAGTTTAAGATTGAGAAGCAGTGAGTTTAAGGATTTGAAGGCCAAGCCTGGTTCAGTTGTTCCACTACAAGTTGAAACAGCCACACAGTTGGATATTGTTGCGGAATTTGAAGTAGACAAGGAAGCACTGGAGACGACATTACCGGAGAGCGATACAGACTACATTTGCGAAAGCAGCGGCGGAGCTTCTGGCCGTGGTGCCTTGGGACCTTTTGGTCTTCTTGTGTTAGCAGATGCTGGACTTTCTGAATTTACTCCTTTGTACTTCTATGTCTCCAAAGGACTCAATGGAAGTCTTCGCACTACTTTCTGCTCTGACCAGTCAAGGTCTTCTGTAGCAACGAATGTTAACAAGAAGGTGTTAGGTAGCGTTGTGCCAGTTTTTGGAGGTGAAAAGTTGTCTTTAAGAGTACTGGTGGACCATTCTATAGTTGAAAGCTTTGCTCAAGGTGGAAGGACTTGTGTCACATCTCGGGTGTATCCAACAAGAGCAATCTATGGAGCTGCCAAATTATTCGTCTTCAACAATGCAACTGATGCCACTGTCACAGCATCAATCAAAGTTTGGCAGATGAACTCTGCATTTATTCGCCCATACCACCCTGAAACTGACACTTAG 1914 0.4765 MGEEKGWSVNVPLLNGGNEEGSRQPSRRVVIGAVCGFLVLISLAALIGFHNAYSGETLYCAVQGTTHGQPILSRGVSAGVSEKTNRHLGAKPFPGWSNTMLSWQRTAFHFQPDKNWMNDPNGPVYYKEWYHFFYQYNPNDAVWGDIVWGHAVSRDMIHWLYLPIAMVPDQWYDANGVWTGSATILSDGQLVMLYTGSTNESVQVQNLAYPADPSDPLLLNWTKYDKNPVLSPPPGIHYRDFRDPTTAMLTSEGKWRISIGSKINKTGIALIYDTEDFKNFELKNGWLRAVQGTGMWECVDFYPVSSINDVGLDTSAYGDGVKHVVKVSLDDDRNDYYAIGSYDEKLASFLPDDVKNDVGIGLRYDYGNFYASKTFFDPSKQRRILWGWITEYDSECVDRTKSWASLQGIPRTVRLDRKTWSNLIQWPVEEVNSLRLRSSEFKDLKAKPGSVVPLQVETATQLDIVAEFEVDKEALETTLPESDTDYICESSGGASGRGALGPFGLLVLADAGLSEFTPLYFYVSKGLNGSLRTTFCSDQSRSSVATNVNKKVLGSVVPVFGGEKLSLRVLVDHSIVESFAQGGRTCVTSRVYPTRAIYGAAKLFVFNNATDATVTASIKVWQMNSAFIRPYHPETDT 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01492 637 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 64 632 - -
Adu01g01492 637 SUPERFAMILY Concanavalin A-like lectins/glucanases 427 627 IPR013320 -
Adu01g01492 637 CDD GH32_Fruct1-like 115 415 - -
Adu01g01492 637 Pfam Glycosyl hydrolases family 32 C terminal 430 622 IPR013189 -
Adu01g01492 637 Gene3D Glycosyl hydrolase domain; family 43 113 438 IPR023296 -
Adu01g01492 637 Pfam Beta-fructofuranosidase, N-terminal domain 12 101 IPR021792 GO:0004564
Adu01g01492 637 Pfam Glycosyl hydrolases family 32 N-terminal domain 109 427 IPR013148 -
Adu01g01492 637 Gene3D - 439 623 - -
Adu01g01492 637 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 64 632 - -
Adu01g01492 637 SMART glyco_32 109 583 IPR001362 GO:0004553|GO:0005975
Adu01g01492 637 ProSitePatterns Glycosyl hydrolases family 32 active site. 109 122 IPR018053 GO:0004553|GO:0005975
Adu01g01492 637 SUPERFAMILY Arabinanase/levansucrase/invertase 102 428 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01492 Adu-Chr1 41297604 41304224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01492 18 634 Glycoside Hydrolase AT1G12240 61.927 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01492 K01193 - gmx:100788844 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01492 01 41297604 41304224 Adu01g01492 01 41297604 41304224 ECH
Adu05g00998 05 13158755 13161492 Adu01g01492 01 41297604 41304224 PCT