Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00473 ATGTACAGAGAGAGAGAGCGAGAGCGAGGTACCAATACCAAATCGGAGGTTGATCGGAAGCGAATCAACGACGTCCTCGACAAGCAGCTGGAGCGATCGTCGCCGTCAACGTCGACGTCGAGGCCAATCAACGGCAAGGACAGGCCCTCCTCTCTCTTATCCGGCAAGTCCTCCTCCGCACGCGATCACGCCCTCAGGGACTCTCGCTCCACCGCCTCCGCCACTATCTCCAAGAACTCTAACGCTTCCGATGAGGAATCTGAGACTGACAGCGAGGAGTCTGATGTTAGTGGTTCTGATGGAGATGACACGTCGTGGATCTCGTGGTTCTGCAATTTGAGAGGGAACGAGTTCTTCTGCGAGGTGGATGATGATTACATCCAGGATGACTTCAACCTTTGTGGATTGAGCAGTCAAGTGCCTTACTATGATTACGCTCTTGATTTGATTTTGGATGTTGAATCCTCTCATGGTGACATGTTTACAGAGGAACAAAATGAATTAATTGAATCAGCAGCAGAGATGCTATATGGTCTGATTCATGCCAGGTATATCTTGACAGGCAAAGGATTGGCCTCCATGCTGGACAAGTACAAGAACTATGATTTTGGTAGATGTCCAAGAGTGTACTGCTCTGGGCAGCCCTGCCTTCCGGTTGGTCAGTCAGATGTTCCAAGGTCCAGTACCGTGAAAATATACTGCCCAAGGTGTGAAGACATTTATTATCCGCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACTACATTTCCTCACCTCTTCCTGATGACTTACGGACAACTGAAGCCACAGAAACCATCACAGAGCTATGTTCCAAGAGTCTTTGGCTTCAAGCTTCACAAGCCATGA 879 0.4869 MYRERERERGTNTKSEVDRKRINDVLDKQLERSSPSTSTSRPINGKDRPSSLLSGKSSSARDHALRDSRSTASATISKNSNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTGKGLASMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDVPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQSYVPRVFGFKLHKP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00473 292 SUPERFAMILY Casein kinase II beta subunit 103 291 IPR035991 GO:0005956|GO:0019887
Adu05g00473 292 MobiDBLite consensus disorder prediction 29 58 - -
Adu05g00473 292 ProSitePatterns Casein kinase II regulatory subunit signature. 206 237 IPR000704 GO:0005956|GO:0019887
Adu05g00473 292 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 98 202 IPR016149 GO:0005956|GO:0019887
Adu05g00473 292 Gene3D - 203 277 - -
Adu05g00473 292 MobiDBLite consensus disorder prediction 1 101 - -
Adu05g00473 292 PANTHER CASEIN KINASE II SUBUNIT BETA 13 292 IPR000704 GO:0005956|GO:0019887
Adu05g00473 292 PANTHER CASEIN KINASE II SUBUNIT BETA 13 292 - -
Adu05g00473 292 Pfam Casein kinase II regulatory subunit 105 288 IPR000704 GO:0005956|GO:0019887
Adu05g00473 292 MobiDBLite consensus disorder prediction 1 28 - -
Adu05g00473 292 PRINTS Casein kinase II regulatory subunit family signature 105 121 IPR000704 GO:0005956|GO:0019887
Adu05g00473 292 PRINTS Casein kinase II regulatory subunit family signature 122 136 IPR000704 GO:0005956|GO:0019887
Adu05g00473 292 PRINTS Casein kinase II regulatory subunit family signature 177 198 IPR000704 GO:0005956|GO:0019887
Adu05g00473 292 PRINTS Casein kinase II regulatory subunit family signature 202 223 IPR000704 GO:0005956|GO:0019887
Adu05g00473 292 PRINTS Casein kinase II regulatory subunit family signature 224 245 IPR000704 GO:0005956|GO:0019887
Adu05g00473 292 PRINTS Casein kinase II regulatory subunit family signature 252 269 IPR000704 GO:0005956|GO:0019887
Adu05g00473 292 SMART CK_II_beta_2 105 288 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00473 Adu-Chr5 4915165 4918064 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00473 K03115 - gmx:100799304 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00473 05 4915165 4918064 Adu05g00473 05 4915165 4918064 ECH
Adu05g00473 05 4915165 4918064 Adu01g01313 01 31336675 31340237 PCT
Adu01g01320 01 31611119 31615511 Adu05g00473 05 4915165 4918064 PCT