Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01313 ATGACAAAAATCGGCAAAGACAGGTCTTCCCTTCTATCATCTTCCTCCAAGGACCCTCGCTCTACATCTATCTCCAAGAACTCAAACATCTCAGAGGAACCTGAAACAGACAGTGAAGAATCAGATGTTAGTGGCTCTGATGGAGATGACACCTCTTGGATCTCATGGTTCTGTAATCTCAGAGGAAATGAATTCTTTTGTGAGGTTGACGATGATTACATCCAAGATGACTTCAACCTGTGTGGGTTAAGCAGTCAAGTGCCTTACTATGATTATGCTCTTGATTTAATATTGGATGTTGAGTCCTCCCATGGTGACATGTTCACAGAGGAACAAAATGAGTTGATTGAATCAGCAGCGGAGATGCTTTATGGTCTGATTCATGCTCGATACGTATTGACAAGCAAAGGAATGGCTGCCATGCTTGACAAGTACAAGAACTATGATTTTGGAAGATGCCCAAGAGTTTACTGCTCTGGACAACCGTGCCTTCCAGTTGGTCAGTCAGATATTCCTAGGTCAAGTACTGTGAAGATATACTGCCCTAGATGTGAAGACCTATATTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCATACTTTGGGACAACATTTCCACACCTCTTCCTCATGACGTATGGACAACTGAAGCCACAAAAACCATCACAGAGCTACGTTCCAAGAGTTTTTGGGTTCAAACTTCACAAGCCATGA 720 0.4292 MTKIGKDRSSLLSSSSKDPRSTSISKNSNISEEPETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYVLTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQSYVPRVFGFKLHKP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01313 239 SMART CK_II_beta_2 52 235 IPR000704 GO:0005956|GO:0019887
Adu01g01313 239 Gene3D - 150 224 - -
Adu01g01313 239 PANTHER CASEIN KINASE II SUBUNIT BETA 14 238 - -
Adu01g01313 239 SUPERFAMILY Casein kinase II beta subunit 50 238 IPR035991 GO:0005956|GO:0019887
Adu01g01313 239 Pfam Casein kinase II regulatory subunit 52 235 IPR000704 GO:0005956|GO:0019887
Adu01g01313 239 MobiDBLite consensus disorder prediction 1 47 - -
Adu01g01313 239 MobiDBLite consensus disorder prediction 1 31 - -
Adu01g01313 239 PRINTS Casein kinase II regulatory subunit family signature 52 68 IPR000704 GO:0005956|GO:0019887
Adu01g01313 239 PRINTS Casein kinase II regulatory subunit family signature 199 216 IPR000704 GO:0005956|GO:0019887
Adu01g01313 239 PRINTS Casein kinase II regulatory subunit family signature 149 170 IPR000704 GO:0005956|GO:0019887
Adu01g01313 239 PRINTS Casein kinase II regulatory subunit family signature 124 145 IPR000704 GO:0005956|GO:0019887
Adu01g01313 239 PRINTS Casein kinase II regulatory subunit family signature 69 83 IPR000704 GO:0005956|GO:0019887
Adu01g01313 239 PRINTS Casein kinase II regulatory subunit family signature 171 192 IPR000704 GO:0005956|GO:0019887
Adu01g01313 239 ProSitePatterns Casein kinase II regulatory subunit signature. 153 184 IPR000704 GO:0005956|GO:0019887
Adu01g01313 239 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 45 149 IPR016149 GO:0005956|GO:0019887
Adu01g01313 239 PANTHER CASEIN KINASE II SUBUNIT BETA 14 238 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01313 Adu-Chr1 31336675 31340237 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01313 K03115 - gmx:100780095 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01313 01 31336675 31340237 Adu01g01313 01 31336675 31340237 ECH
Adu05g00473 05 4915165 4918064 Adu01g01313 01 31336675 31340237 PCT