Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00469 ATGAAAAGAACAACCAAATTTGGGGTGTCCAAACATAGTACAACACTAGAATATTCCCAGCTTAGCACTTCTTGTTCATGTAACCAAAATAACAAACATCAAAGCCCTAATTCCTCTCTCTCTATAAAATTTCAACAAATTCTTCCACGCAAATTTGTGCTTGCGCCACAACAATTTCCAATTTATAAAACTGTGGCATCTTGCTTCGGCGCATTTTCCCTCTTTAATTTACAAAAAATGGGTTGTTTTTGCTCCAAAGTAAGTAAACAAATTGCCGTGGAAGAAGAAGATCCAATGAGTCTTTCGAAGCAAACAGTTTTTAGTGTTAGTGAGGTTGAAGCACTGTTTGAGCTTTTTAAACGTATTAGTGGATCTGTCATTGATGATGGACTAATAAGCAAGGAAGAATTTATATTGGCAATTTTCAATAACAAGGAAAAAGACAATCTCTTTGCAAGTCGAATCTTTGATTTATTTGATGTAAAGAAGAAAGGAGTTATCGACTTTGGCGATTTTGTTCGAGCACTCAATGTTTTCCACCCACATACACCTCAAAAAGTCAAGATAGATTTTTCATTTAGACTCTACGATTTGGACAAATCAGGTTTTATAGAGCGCCATGAGGTAAAGGAAATGATACTTGCACTTCTCACTGAATCTGAAATGAAGTTACCGGATGAGATGATAGAAACAATTATAAACAAGACTTTCTTGGCGGCAGACCCAAACCAAGATGGGAAAATAGACGAGAATGAATGGGAGGCTTTTGTTACAAAAAATCCATCATTGCTGAAAATAATGACATTACCATACCTGAGTGACATAACAACAACATTCCCAAGTTTCGTATTTCACTCTAAGGTTGATGACAACGTTGGTGCTTGA 885 0.3605 MKRTTKFGVSKHSTTLEYSQLSTSCSCNQNNKHQSPNSSLSIKFQQILPRKFVLAPQQFPIYKTVASCFGAFSLFNLQKMGCFCSKVSKQIAVEEEDPMSLSKQTVFSVSEVEALFELFKRISGSVIDDGLISKEEFILAIFNNKEKDNLFASRIFDLFDVKKKGVIDFGDFVRALNVFHPHTPQKVKIDFSFRLYDLDKSGFIERHEVKEMILALLTESEMKLPDEMIETIINKTFLAADPNQDGKIDENEWEAFVTKNPSLLKIMTLPYLSDITTTFPSFVFHSKVDDNVGA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00469 294 ProSiteProfiles EF-hand calcium-binding domain profile. 184 219 IPR002048 GO:0005509
Adu05g00469 294 ProSitePatterns EF-hand calcium-binding domain. 241 253 IPR018247 -
Adu05g00469 294 PANTHER CALCINEURIN B 80 292 IPR045198 GO:0005509|GO:0019722|GO:0019900
Adu05g00469 294 PRINTS Recoverin family signature 202 220 - -
Adu05g00469 294 PRINTS Recoverin family signature 155 176 - -
Adu05g00469 294 PRINTS Recoverin family signature 93 107 - -
Adu05g00469 294 PRINTS Recoverin family signature 248 268 - -
Adu05g00469 294 SMART efh_1 188 216 IPR002048 GO:0005509
Adu05g00469 294 SMART efh_1 151 179 IPR002048 GO:0005509
Adu05g00469 294 SMART efh_1 232 260 IPR002048 GO:0005509
Adu05g00469 294 CDD EFh 154 213 IPR002048 GO:0005509
Adu05g00469 294 ProSiteProfiles EF-hand calcium-binding domain profile. 147 182 IPR002048 GO:0005509
Adu05g00469 294 PANTHER CALCINEURIN B-LIKE PROTEIN 80 292 - -
Adu05g00469 294 ProSiteProfiles EF-hand calcium-binding domain profile. 228 263 IPR002048 GO:0005509
Adu05g00469 294 Pfam EF-hand domain pair 188 256 IPR002048 GO:0005509
Adu05g00469 294 CDD EFh 188 258 IPR002048 GO:0005509
Adu05g00469 294 SUPERFAMILY EF-hand 101 283 IPR011992 -
Adu05g00469 294 Gene3D - 97 291 - -
Adu05g00469 294 ProSitePatterns EF-hand calcium-binding domain. 197 209 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00469 Adu-Chr5 4889488 4893551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00469 80 290 EF-hand Containing Proteins AT4G17615 69.668 1.18e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00469 K06268 - sly:100820708 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00469 05 4889488 4893551 Adu05g00469 05 4889488 4893551 ECH
Adu05g00469 05 4889488 4893551 Adu01g01321 01 31771427 31776036 PCT