Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03202 ATGGATTTTCGGTACTTTTCTATGCCTACGGACGATGAATTTGAGAAGCTTCTCATTCGGATGAATCCTCCAAGAGTAACTGTGGACAACAGTTCTAGCAAAACAGACACATTGATAAAGGTTGATGGTGCAAATAGGCGTGGGATACTATTGAAGATGGTTCAAACTCTGATTGATATGAACATCATTATAAATAGAGCTTACATTTCCTCTGATGGAGAATGGTTTATGGATGGTAATAAGCTTCTAAATTCTCTCCAATTTTTTTTATATATATTTTTTATCTTTTTTTTTTGGGCTTCAACTACCACTATGCACAATCCAGTGTTTCATTGTACGGATCAAAATGGGAATAAGCTTCTTGAAGATAATTTAGCCGACAGAATTCAACAGTCACTTGGTCCAGCAGCCTTTGGTTTCCAAGCTCTTAGGAGATCCATTGGAGTTGAAGTTGAATCCATTTTAGAACACACAACAATTGAATTAACCGGAAAAGACCGGCCGGGACTACTCTCGGAGATTTTCGCCATCCTGGCAAACCTAAAATGCAATGTGTTGGCAGCAGAAGTATGGACACACAATTCAAGAATGGCATCAGTTCTTTACATAACTGATGAGGCAACAAAGTTGCCAATCAACAATCCTGAACATCTTGCAAAGATCAAGCAACTCTTGTTCTATGTTCTTAGAGGGGACATAGAAAACAAGAGTGGTGGTGTTGATGCCAACACTGCTGTTGTCTCTGTTGGATCAACTCACAAGGAAAGGAGGCTGCACCAGATGATGTATGCTAATCGAGATTACGACACGTGTGATGAGGATTGTAATGGATCAACAAGTGATGAGAGTAACAAGAAGAAACCAATTGTGACTGTTGATTATTGTGCTGATAAAGTTTACACTGTTGTGAACTTGAGGTGCCTAGATAGGCCAAAGTTGCTCTTTGATGCTGTTTGCACTCTCACTGATATGCAGTATGTTGTTTACCATGGAACTGCCATTGCTGAAGGACCAGAGGCATATCAGGAATATTATATAAGGCATATAGATGGATATCCCATCAGCTCTGAAGCAGAAAGACAAAGAGTGATTCATTGCTTGGAAGCTGCTATTAAAAGAAGAACTTCTGGAGGCATACAACTAGAATTTTGTTGTGAAGATAGAGTTGGACTTCTCTCAGATGTAACTCGAATATTCAGAGAGAATGGATTTTCAGTAATTCGTGCTGAAGTTACAACAAGAGATTGTAAAGCCATGAATGTGTTCTATGTTGCTGATGCATATGGTGCTCCTGTTAAGACTGAAACAATTGAAGCTGTTAGAAAAGAAATTGGCTTCACCATACTTCATGTCAAGAACAATGATAACAATAACAATGACAATGTAATGAATGTATTCTCATCATCAAAGGATACAACACCCCAAGAGAGTGGAACATTTTCTTTGTCTAATCTTTTTAAAATGAGGTCTGTCAAGTTCTTCTGCAAAAGCTTCATGGGGTCTTTTTCTTGA 1512 0.3843 MDFRYFSMPTDDEFEKLLIRMNPPRVTVDNSSSKTDTLIKVDGANRRGILLKMVQTLIDMNIIINRAYISSDGEWFMDGNKLLNSLQFFLYIFFIFFFWASTTTMHNPVFHCTDQNGNKLLEDNLADRIQQSLGPAAFGFQALRRSIGVEVESILEHTTIELTGKDRPGLLSEIFAILANLKCNVLAAEVWTHNSRMASVLYITDEATKLPINNPEHLAKIKQLLFYVLRGDIENKSGGVDANTAVVSVGSTHKERRLHQMMYANRDYDTCDEDCNGSTSDESNKKKPIVTVDYCADKVYTVVNLRCLDRPKLLFDAVCTLTDMQYVVYHGTAIAEGPEAYQEYYIRHIDGYPISSEAERQRVIHCLEAAIKRRTSGGIQLEFCCEDRVGLLSDVTRIFRENGFSVIRAEVTTRDCKAMNVFYVADAYGAPVKTETIEAVRKEIGFTILHVKNNDNNNNDNVMNVFSSSKDTTPQESGTFSLSNLFKMRSVKFFCKSFMGSFS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03202 503 CDD ACT_ACR_3 300 374 - -
Adu04g03202 503 SUPERFAMILY ACT-like 156 224 IPR045865 -
Adu04g03202 503 ProSiteProfiles ACT domain profile. 380 456 IPR002912 -
Adu04g03202 503 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 108 492 IPR040217 -
Adu04g03202 503 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 7 79 IPR040217 -
Adu04g03202 503 Gene3D - 157 227 - -
Adu04g03202 503 SUPERFAMILY ACT-like 35 78 IPR045865 -
Adu04g03202 503 Pfam ACT domain 158 206 IPR002912 -
Adu04g03202 503 Pfam ACT domain 380 427 IPR002912 -
Adu04g03202 503 PANTHER OS08G0515400 PROTEIN 7 79 - -
Adu04g03202 503 PANTHER OS08G0515400 PROTEIN 108 492 - -
Adu04g03202 503 SUPERFAMILY ACT-like 376 445 IPR045865 -
Adu04g03202 503 ProSiteProfiles ACT domain profile. 159 240 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g03202 Adu-Chr4 120116807 120120487 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03202 - - adu:107486425 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g03202 04 120116807 120120487 Adu04g03202 04 120116807 120120487 ECH
Adu04g03202 04 120116807 120120487 Adu01g01544 01 45008145 45011539 ECH