Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01544 ATGGAGTGGTCAGCTTGTACGGATGAATACGAGAAGCTTGTGATTCGGATGAGCACGCCTAGGGTCGTAATTGACAATGCCGTGTGCTCCACAGCTACTATAGTTAAGGTTGATAGCGCCAGAAAACATGGGATTTTGTTGGATGCAATACAAGTGCTCGCTGATTTGGACCTTTTGATTAAGAAGGCTTACATTTCCTCCGACGGAAGGTGGTTCATGGATGTTTTCCATGTTACAGACCAATTAGGAAACAAGTTAACGGATGAGAGCGTATTAAATTATATTGAACAGTCACTTGGGAGTATTCACAATGGTAAAATCAACAGCTCCAATGGTTTCACTGCCCTGGAATTAACAGGCACGGACCGTGTTGGTATTCTTTCGGAGGTGTTCGCTGTACTGGCTGAGCTGCAGTGCGATGTGGTTGAGGCAAAGGTTTGGACTCACAATGGCAGGATTGCCTCCCTGATCTATGTTAGAGACTGTGATTCCAGATCTGCTCTTGAGGACTATCAGAAGATTAATAAGCTTGAAGCACGTTTAAGAAATGTTTTGAAGGGTGACAATGACATTAGGAGTGCAAAAACTTCAATTTCTAATTCTGTCATACACCCGGAAAGAAGGCTACACCAGATGATGTTTGCTGACCGTGACTATGAAAGGAGTCGCATTTTCAAGTTTACCCCTGAGACACCATTTGTATCGGTGCAAAATTGGGCGGAAAAGGGTTACTCTGTTGTGAATGTTCAGTGCAAGGATCGAATTAAGCTAATGTTCGATGTTGTCTGCAATTTGACAGACATGGAATATGTTGTGTTTCATGCAACTATTAACACAAAAGATGATCAAGCTTACCTGGAGTTTTATATAAGGCATAAAGATGGCACTCCAATTAGTTCAGAACCAGAGCGCCAACGTGTGATTCAATGCTTGCAAGCTGCTGTGGAGAGAAGGGCAAATGAGGGTGTTAGGCTAGAGTTATATGCTGAAGACAAGCAGGGCCTTTTAGCAGAGGTTATGAGAACGTTCAGAGAGAATGGGATGAATGTGATTAGAACTGAAATATCTACCGTTGGGGGTGTGGCTGCAAATGTTTTCTATGTAACTGATGCAATGGGTTACCCAGCTGACCCAAAAATAATAGAATCTGTTAGGCAGAAAATTGGGTTAAGCAATTTAAAAGTGAAGGAGTTGCCTTTACTACGTCAACAGAAGACAAAGAGCGAAGGAGATCAACCAGGTGGAGTTGGTGGGGCAGTGTTATTGTCCCTTGGTAGCCTCGTGAGGAGGAATCTCTACAATTTGGGCTTAATCAAATCTTGTTCTTAA 1329 0.4281 MEWSACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILLDAIQVLADLDLLIKKAYISSDGRWFMDVFHVTDQLGNKLTDESVLNYIEQSLGSIHNGKINSSNGFTALELTGTDRVGILSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVRDCDSRSALEDYQKINKLEARLRNVLKGDNDIRSAKTSISNSVIHPERRLHQMMFADRDYERSRIFKFTPETPFVSVQNWAEKGYSVVNVQCKDRIKLMFDVVCNLTDMEYVVFHATINTKDDQAYLEFYIRHKDGTPISSEPERQRVIQCLQAAVERRANEGVRLELYAEDKQGLLAEVMRTFRENGMNVIRTEISTVGGVAANVFYVTDAMGYPADPKIIESVRQKIGLSNLKVKELPLLRQQKTKSEGDQPGGVGGAVLLSLGSLVRRNLYNLGLIKSCS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01544 442 Pfam ACT domain 116 168 IPR002912 -
Adu01g01544 442 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 440 IPR040217 -
Adu01g01544 442 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Adu01g01544 442 CDD ACT_ACR_3 244 318 - -
Adu01g01544 442 SUPERFAMILY ACT-like 110 184 IPR045865 -
Adu01g01544 442 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Adu01g01544 442 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 440 - -
Adu01g01544 442 Gene3D - 113 191 - -
Adu01g01544 442 SUPERFAMILY ACT-like 29 101 IPR045865 -
Adu01g01544 442 CDD ACT_ACR_1 32 103 - -
Adu01g01544 442 SUPERFAMILY ACT-like 320 392 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01544 Adu-Chr1 45008145 45011539 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01544 - - gmx:100794729 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g03202 04 120116807 120120487 Adu01g01544 01 45008145 45011539 ECH
Adu01g01544 01 45008145 45011539 Adu01g01544 01 45008145 45011539 ECH