Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02442 ATGGTTTCATTTTCAGTTGAAGGAACTGTGTGGTGCTGTGTGTTAATGGTTATTATAACTGTGAGTTTTGCTGGGGACATAGTACACCCTGATAATATTGCTCCCAAGAGACCTGGTTGTGATAACAACTTTGTTCTGGTTAAAGTCCCAACTTGGATTAATGGTGTGGAGAACTGTGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCTAAAGAAAAACATGCCACCCATACTAGAGTCGCCATTGCGGACCCTCCTGATTGTTGTAGCAAGCTGAAGAATAAGCTCACTGGCGAGATCATTTTGGTGCACCGAGGACAATGTAGTTTCACAACCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCGATCCTCATTATAAATAATCGGACAGAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACTGATATTGATATTGGAATTCCTGCTGTGATGCTTCCACAAGATGCTGGTGAAAACATTAAAAGTCATATACAAAACAAATCGATAGTGTCTGTGCAGTTATACTCTCCGCTGCGCCCATTAGTTGATGTAGCGGAAGTGTTTTTATGGCTTATGGCTGTTGGTACCATTCTCTGTGCTTCTTATTGGTCTGCCTGGACAACCAGAGAGGCTGCTGTTGAGCGGGAGAAGCTATTAAAGGATGCTTCGGATGAATATTTGAATACTGAGAATGCTGGTTCTACTGGTTATGTAGAAATCAGTACCATGGCAGCAATTTCTTTTGTTGTGATCGCTTCTTGTTTCTTGCTTATGCTTTACAAATTAATGGCATCCTGGTTTATTGAAGTTCTGGTGGTTCTATTTTGCATTGGTGGTGTTGAGGGACTGCAAACTTGCTTGGTGGCTCTGTTATCATGTTTCAGATGGTTTCAACATGCTGGGCAAACATTTGTAAAAATACCCTTCTTTGGAGCTGTCTCATATTTGACGCTTGCTATGACTCCCTTCTGCATAGTATTTGCCGTGCTTTGGGGAGTTTTTCGACACGTATCTTTTGCATGGATTGGACAAGATATTCTTGGAATTGCATTGATAATTACGGTTCTTCAGATTGTCCGCATACCAAATCTCAAGGTTGGAACTGTTCTTCTTAGTTGCGCCTTTCTATATGACATCTTCTGGGTGTTTGTCTCTAAGTGGTGGTTCCATGAGAGCGTAATGATAGTGGTAGCTCGAGGCGATAGGAGTGGAGAAGATGGTATCCCCATGCTGCTTAAAATACCGCGTCTGTTTGATCCTTGGGGTGGTTACAGCATAATTGGTTTTGGGGACATAATCTTACCAGGGCTTCTAGTGGCATTTTCACTAAGGTATGATTGGCTGGCAAAGAGGAACCTTCGGTCTGGATACTTCGTGTGGGCAATGAGTGCTTACGGTTTAGGTCTCCTTATCACATATGTTGCTTTGAACTTGATGGATGGGCATGGTCAACCAGCATTGCTTTATATCGTCCCGTTTACTCTTGGCACATTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGCTTTTATGGACAAGAGGGGAACCAGAAATGCCTTGCCCTCATAACCAAGAGTCTCAATAA 1608 0.4241 MVSFSVEGTVWCCVLMVIITVSFAGDIVHPDNIAPKRPGCDNNFVLVKVPTWINGVENCEYVGVGARFGPTLESKEKHATHTRVAIADPPDCCSKLKNKLTGEIILVHRGQCSFTTKANIAEEAGASAILIINNRTELFKMVCEENETDIDIGIPAVMLPQDAGENIKSHIQNKSIVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTTREAAVEREKLLKDASDEYLNTENAGSTGYVEISTMAAISFVVIASCFLLMLYKLMASWFIEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAGQTFVKIPFFGAVSYLTLAMTPFCIVFAVLWGVFRHVSFAWIGQDILGIALIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDRSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKRNLRSGYFVWAMSAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKLLWTRGEPEMPCPHNQESQ 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02442 535 SUPERFAMILY PA domain 95 139 IPR046450 -
Adu04g02442 535 Gene3D - 41 184 - -
Adu04g02442 535 Pfam Signal peptide peptidase 244 523 IPR007369 GO:0004190|GO:0016021
Adu04g02442 535 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 12 534 - -
Adu04g02442 535 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016021
Adu04g02442 535 PANTHER SIGNAL PEPTIDE PEPTIDASE 12 534 IPR007369 GO:0004190|GO:0016021
Adu04g02442 535 Pfam PA domain 89 167 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02442 Adu-Chr4 109359562 109365280 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02442 41 181 Miscellaneous Gene Families AT2G30290 30.667 6.94e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02442 K09597 - gmx:100808921 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02442 04 109359562 109365280 Adu04g02442 04 109359562 109365280 ECH
Adu04g02442 04 109359562 109365280 Adu02g00042 02 530376 536640 PCT