Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00042 ATGGTTCTTCCACATGGTGTGTTCCTTCTCTTCATGCTCTCTTCTGCAACTTTGGCTTTGGCTGGAGACATAGTTCACCATGATGATGTTGCTCCAAGAAGACCTGGTTGTGAGAACAACTTTGTTCTGGTCAAAGTCCCCACTTGGATTGATGGTGTTGAAAACAGTGAGTATGTAGGTGTTGGTGCAAGATTCGGCCCTACTTTGGAGTCAAAAGAGAAACGTGCCAACCACACTAGAGTTGTCATGGCTGACCCTCCTGATTGTTGTTCCAAGCCTAAGAATAAGCTCACTAGCGAGATCATTGTGGTGCAACGAGGAAAATGTAGTTTCACAACCAAGGCAAATATAGCTGAGGAAGCTGGTGCTTCAGCCATCCTCATTATAAATTATAGGACAGAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACCGATGTTGATATTGGTATACCCGCTGTCATGCTTCCACAATATGCTGGATTAAACATAGAAAAACATATAAAAAACAACTCCACAGGTATGTTTTTCTTTATACACTCCTCTTATTTGATTGTTATACTTTATATTTCGATCCATGTATGTGCTTCTTATTGGTCTGCTTGGACTGCTAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCGGATGAATACCTTAGCACACAGAATGTTGGTTCAAGTGGTTATGTGGAAATCAGTACCGTGGCTGCAATTTTATTTGTTGTGATCGCTTCTTGTTTCCTGGTTATGCTTTACAAGTTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTATTCTGCATTGGGGGAGTAGAGGGACTGCAAACTTGTTTGGTGGCTCTTTTATCATGTTTCAGATGGTTCCAACATGCTGCACAAACATTTGTGAAAATTCCCTTCTTTGGAGCCGTCTCATATCTGACATTTGCCGTTACCCCCTTTTGCATAGTGTTCGCTGTGATATGGGCAGTTTATCGTCGTGCTTCGTTTGCTTGGATCGGTCAAGACATCCTTGGTATCACACTGATAATTACAGTTCTTCAGATTGTACGGATACCGAATCTCAAGGTTGGAACTGTTCTTCTCAGCTGCGCCTTCCTATACGACATCTTTTGGGTGTTCGTTTCTAAACGGTGGTTCCATGAGAGCGTCATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCAATGCTACTAAAGATACCACGTTTGTTCGATCCTTGGGGTGGTTACAGCATCATCGGTTTTGGGGACATTATCTTACCAGGGCTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAGCCTTCGCGCTGGGTACTTCTTGTGGGCAATGACTGCCTATGGCTTAGGTCTCCTCATCACATACGTGGCTTTGAACTTGATGGATGGACATGGCCAACCAGCTTTGCTTTATATAGTTCCCTTCACACTTGGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGATTTTATGGACAAGGGGGGAACCAGAGAGACCTTGCCCTCACATGCAAGAAGAGGATCAACAATCACTTAACCAGCATTGA 1596 0.4298 MVLPHGVFLLFMLSSATLALAGDIVHHDDVAPRRPGCENNFVLVKVPTWIDGVENSEYVGVGARFGPTLESKEKRANHTRVVMADPPDCCSKPKNKLTSEIIVVQRGKCSFTTKANIAEEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQYAGLNIEKHIKNNSTGMFFFIHSSYLIVILYISIHVCASYWSAWTAREAAIEQEKLLKDASDEYLSTQNVGSSGYVEISTVAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAAQTFVKIPFFGAVSYLTFAVTPFCIVFAVIWAVYRRASFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKRWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKSLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCPHMQEEDQQSLNQH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00042 531 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 5 530 - -
Adu02g00042 531 SUPERFAMILY PA domain 97 134 IPR046450 -
Adu02g00042 531 Pfam Signal peptide peptidase 233 512 IPR007369 GO:0004190|GO:0016021
Adu02g00042 531 Pfam PA domain 87 163 IPR003137 -
Adu02g00042 531 Gene3D - 37 177 - -
Adu02g00042 531 SMART psh_8 232 501 IPR006639 GO:0004190|GO:0016021
Adu02g00042 531 PANTHER SIGNAL PEPTIDE PEPTIDASE 5 530 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00042 Adu-Chr2 530376 536640 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00042 K09597 - gmx:100795197 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00042 02 530376 536640 Adu02g00042 02 530376 536640 ECH
Adu04g02442 04 109359562 109365280 Adu02g00042 02 530376 536640 PCT