Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02211 ATGGCCCTCTTGAAGACCTCCACCACTCTCTCCTTCAGAGCAACCGCTTTTCCGCTCCATGGCCATACCACCAACACCAGGAAGTTGCATTGGAAGCCTACTCAAGCAGCTTTGACATCCAGTTTCCACCTTCCTATGCGTAGCTTTGAGGCTAAGAACAGGACTTCCACAGATGACGTAAAACGTCTGAGATTGATAACTGCCATTAAGACACCATACCTACCCGATGGTCGCTTTGATCTTGAAGCATATGATACCTTAGTAAATTTGCAGATTGAAAATGGAGTTGAAGGTGTCATTGTTGGTGGTACAACTGGAGAAGGCCAATTAATGAGCTGGGATGAACACATAATGCTTATTGGGCACACAGTCAACTGTTTCGGAGTGAAAATCAAGGTTATAGGAAACACCGGAAGCAACTCAACAAGGGAAGCAATCCATGCCACAGAGCAGGGTTTTGCTGTTGGGATGCACGCTGCCCTTCACATAAACCCTTACTACGGCAAAACTTCCTTGAATGGTTTGATTTCTCATTTCAATACCGTGCTTCCGATGGGCCCTACCATCATATACAATGTGCCTTCAAGGACCAGTCAAGACATTCCTCCACAGGTGATTCAAACCTTAGCACAGAGTGCGAGTTTAGCCGGTGTCAAGGAATGTATGGGAAATGACAGGATCAAACAATATACAGATAATGGCATTGTTGTGTGGAGCGGGAATGATGACCAATGCCATGATGCTAGATGGGGTTACGGAGCGACAGGAGTGATATCTGTCGCAAGCAACCTGGTTCCCGGTTTAATGCGAGAACTCATAATTGGTGGTGAGAATCCGGCGCTGAATTCTAAGCTCATGCCTCTTGTTGAATGGCTTTTTTGCGAGCCAAACCCCATCGGTTTGAACACAGCTCTTGCTCAACTCGGAGTTGCTCGGCCGGTTTTCAGGTTACCATATGTACCTCTCCCTTTGAAGAAGCGGATGGAATTTGTCAATTTGGTGAAGGGAATCGGTCGAGAGCACTTTATTGGAGACAAAGATGTTCAGGTTCTTGATGATAATGACTTTATCTTAATTGGTCGTCATTAA 1089 0.4573 MALLKTSTTLSFRATAFPLHGHTTNTRKLHWKPTQAALTSSFHLPMRSFEAKNRTSTDDVKRLRLITAIKTPYLPDGRFDLEAYDTLVNLQIENGVEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGVKIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLNGLISHFNTVLPMGPTIIYNVPSRTSQDIPPQVIQTLAQSASLAGVKECMGNDRIKQYTDNGIVVWSGNDDQCHDARWGYGATGVISVASNLVPGLMRELIIGGENPALNSKLMPLVEWLFCEPNPIGLNTALAQLGVARPVFRLPYVPLPLKKRMEFVNLVKGIGREHFIGDKDVQVLDDNDFILIGRH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02211 362 SUPERFAMILY Aldolase 65 336 - -
Adu04g02211 362 ProSitePatterns Dihydrodipicolinate synthase signature 2. 191 221 IPR020625 GO:0016829
Adu04g02211 362 SMART DHDPS_2 62 338 IPR002220 GO:0016829
Adu04g02211 362 Pfam Dihydrodipicolinate synthetase family 64 335 IPR002220 GO:0016829
Adu04g02211 362 Gene3D Aldolase class I 56 362 IPR013785 -
Adu04g02211 362 ProSitePatterns Dihydrodipicolinate synthase signature 1. 98 115 IPR020624 GO:0016829
Adu04g02211 362 PRINTS Dihydrodipicolinate synthase signature 95 116 IPR002220 GO:0016829
Adu04g02211 362 PRINTS Dihydrodipicolinate synthase signature 131 149 IPR002220 GO:0016829
Adu04g02211 362 PRINTS Dihydrodipicolinate synthase signature 186 203 IPR002220 GO:0016829
Adu04g02211 362 PRINTS Dihydrodipicolinate synthase signature 163 179 IPR002220 GO:0016829
Adu04g02211 362 CDD DHDPS 64 334 IPR005263 GO:0008840|GO:0009089
Adu04g02211 362 TIGRFAM dapA: 4-hydroxy-tetrahydrodipicolinate synthase 65 329 IPR005263 GO:0008840|GO:0009089
Adu04g02211 362 PANTHER DIHYDRODIPICOLINATE SYNTHASE 19 361 IPR002220 GO:0016829
Adu04g02211 362 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE, CHLOROPLASTIC 19 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02211 Adu-Chr4 104628712 104631654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02211 K01714 - gmx:100788930 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02211 04 104628712 104631654 Adu04g02211 04 104628712 104631654 ECH
Adu04g02211 04 104628712 104631654 Adu02g02281 02 87751911 87755097 PCT