Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02281 ATGGCGGCGATGTTGAAGAGTTATAGTAGCACTGCGTGCTTCCCTGCTTCTGGTTTCACTGTTTTTCGCTCCAACAATGCCACCAACGCCAGTAACAAGAGGAGCTCAAACTGGAAGCCTCCACAGGCAGCTATCATACCCAATTTGCATCTCCCAATGCGCAGCTTTGAGGTGAAAAATAGGACATCAACTGAGGACATAAAGTGTCTGAGATTGATAACTGCGCTCAAAACTCCGTACCTACCTGATGGCCGATTTGATCTAGAAGCGTATGATGATTTGGTGAACAAGCAAATTGAAAACGGTGTAGAAGGTATTATTGTTGGTGGCACAACTGGTGAAGGCCAATTAATGAGCTGGGACGAACACATCATGCTTATCGGGCACACGGTCAATTGTTTTGGCAGTAAAATCAAGGTTGTTGGTAACACCGGAAGTAACTCCACGAGGGAAGCAATCCATGCCAGTGAGCAGGGTTTTGCAGTTGGAATGCATGCTGCCCTTCATATAAACCCTTACTACGGCAAAACCTCCTTGGACGGTATGATTTCTCACTTCGAAAGCGTGATTTCCATGGGCCCTACAATCATATATAATGTTCCTTCGAGGACTGGTCAAGATATTCCTCCTCATGTGATTCAAACCTTGGCTCAAAGTGCTACCTTGGCCGGTGTCAAGGAATGTGTTGGAAACGATCGGATCAAACAGTACACGGATGATGGCATTGTTGTGTGGAGTGGCAACGATGATCAATGCCATGATGCTAGATGGGGCTATGGTGCCACCGGAGTGATATCTGTCACCAGCAACCTTGTTCCTGGTTTGATGCGAGACATCATGTTTGCAGGGAAGAATCCAACATTGAATTCAAAGCTCCTTCCTCTGATGGACTGGCTTTTCCAGGAGCCAAACCCGATTGGTTTAAACACAGCTCTTGCCCAACTTGGGGTTGTCAGACCGGTTTTCAGGCTGCCGTACGTGCCGCTCCCTGCGGAGAAAAGGATTGAGTTTGTGAACTTGGTGAAGCAAATTGGCCGAGAACATTTTGTTGGAGACAAAGATGTTCAGGTTCTTGATGATGATGATTTTATCTTAGTTGGTCGATATTAG 1110 0.464 MAAMLKSYSSTACFPASGFTVFRSNNATNASNKRSSNWKPPQAAIIPNLHLPMRSFEVKNRTSTEDIKCLRLITALKTPYLPDGRFDLEAYDDLVNKQIENGVEGIIVGGTTGEGQLMSWDEHIMLIGHTVNCFGSKIKVVGNTGSNSTREAIHASEQGFAVGMHAALHINPYYGKTSLDGMISHFESVISMGPTIIYNVPSRTGQDIPPHVIQTLAQSATLAGVKECVGNDRIKQYTDDGIVVWSGNDDQCHDARWGYGATGVISVTSNLVPGLMRDIMFAGKNPTLNSKLLPLMDWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPAEKRIEFVNLVKQIGREHFVGDKDVQVLDDDDFILVGRY 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02281 369 PRINTS Dihydrodipicolinate synthase signature 102 123 IPR002220 GO:0016829
Adu02g02281 369 PRINTS Dihydrodipicolinate synthase signature 138 156 IPR002220 GO:0016829
Adu02g02281 369 PRINTS Dihydrodipicolinate synthase signature 170 186 IPR002220 GO:0016829
Adu02g02281 369 PRINTS Dihydrodipicolinate synthase signature 193 210 IPR002220 GO:0016829
Adu02g02281 369 PANTHER DIHYDRODIPICOLINATE SYNTHASE 4 369 IPR002220 GO:0016829
Adu02g02281 369 ProSitePatterns Dihydrodipicolinate synthase signature 1. 105 122 IPR020624 GO:0016829
Adu02g02281 369 CDD DHDPS 71 341 IPR005263 GO:0008840|GO:0009089
Adu02g02281 369 Gene3D Aldolase class I 63 369 IPR013785 -
Adu02g02281 369 TIGRFAM dapA: 4-hydroxy-tetrahydrodipicolinate synthase 72 341 IPR005263 GO:0008840|GO:0009089
Adu02g02281 369 Hamap 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 68 343 IPR005263 GO:0008840|GO:0009089
Adu02g02281 369 ProSitePatterns Dihydrodipicolinate synthase signature 2. 198 228 IPR020625 GO:0016829
Adu02g02281 369 Pfam Dihydrodipicolinate synthetase family 70 343 IPR002220 GO:0016829
Adu02g02281 369 PANTHER DIHYDRODIPICOLINATE SYNTHASE-RELATED 4 369 - -
Adu02g02281 369 SMART DHDPS_2 68 345 IPR002220 GO:0016829
Adu02g02281 369 SUPERFAMILY Aldolase 72 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02281 Adu-Chr2 87751911 87755097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02281 K01714 - gmx:100788930 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02211 04 104628712 104631654 Adu02g02281 02 87751911 87755097 PCT