Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02201 ATGAAGAATTATCCTCGTTTCACCCTTGAGGAAGAGGTTGATGTTAAAGAAAAGGGCTCATGGGAGCAAGATCCTAAGGAACCGTACACCTTCCCGAGTCGCCGCCGAACCAACTCGCCGCCGAGTCGCGAACTCATAGCTGAGCCCGCCGTTGATGCTCTTCAGAAGCTCATCGCCCATGGTTACCTCCGCGGCGAGGCTGACCCCGCCGGTGGCTGCCCTGAGGCGAAGCTTCTCGCGAATCTTATCGAATCCGTCTGCAAGTGCCACGATCTCGGCGATGATGCCGTCGAATTGCTGGTTCTGAAGTCTCTTTTATCTGCAGTAACCTCAATTTCACTGAGAATCCACGGTGATTGCTTGCTTTTGATTGTGAGAACTTGTTATGATATATACCTTGGTAGCAAGAATGTGGTGAATCAAACAACGGCGAAGGCTTCGTTGATTCAGATGCTTGTGATTGTTTTTAGGAGAATGGAGGCGGATTCCTCCACAGTTCCGGTTCAGCCGATTGTTGTGGCTGAACTGATGGCGCCCGTGGAGAAATCTGATGCAGATAACTCGATTACACAGTCTGTGCAGGGTTTTATAACGAAGGTTATGCAGGACATTGATGGGGTTTTGAACCCTGCTACGCCGAGTAGCAGGGTTTCCGCATTGGGAGGCCACGATGGTGCATTTGAGACCACTACCACTGCCACTGTGGAGACCACGAATCCGGCGGATTTGTTGGATTCCAGTGACAAGGACATGCTGGATGCGAAGTATTGGGAGATCAGTATGTACAAGACTGCATTGGAAGGGAGGAAAGGAGAGCTTGTGGATGGCGAGGTGGTGGAGAGGGATGATGATATGGAGATCCAGATTGGGAATAAGCTGAGGAGGGATGCATTTTTGGTGTTCAGGGCACTTTGTAAGTTATCTATGAAGACACCCCCTAAGGAGGCGTCCGCAGATCCGCAGCTGATGAAGGGGAAGATTGTGGCCCTAGAGCTGTTGAAGATCTTGCTGGAGAATGCTGGAGCTGTCTTCAGGACTAGCGACAGGATGGTCAATGGACTTCTTAAAACTGCCCAAGGAATCCCTCCTGGTGTAACCACCACGGTTTTGCCACCTCAAGAGGAAACATTAAAGCTTGAAGCATTGAAATGCTTGGTTGCTGTATTAAAATCTATGGGAGATTGGATGAACAAACAGTTGCGCATTCCAGAACCTCTTTCATCAAAGAAAGTGGAAGCAGTTGATAATGGGCATGAGGCTGGAGGTCATCCTATGGTAAATGGGAATGGAGAAGAGTCAGCTGAAGGATCAGAAACTCATTCTGAGATCTCCAATGATGCATCTGATGTTTCCACCATTGAGCAACGCCGGGCATATAAATTGGAACTCCAGGAAGGTATATCATTGTTTAATAGGAAGCCTAAGAAAGGAATTGAATTCCTCATCAATGCCAACAAAGTGGGTAACTCTCCGGAAGATATAGCTGCTTTTCTTAAAGATGCTTCTGGGTTGAACAAGACTCTGATTGGTGATTATCTGGGAGAAAGGGATGAAATGTCCTTGAAAGTAATGCATGCCTATGTGGATTCTTTTGACTTTCAAGGGATGCAATTTGATGAGGCAATCAGGGTTCTCCTTCAGGGATTTAGACTGCCTGGTGAGGCCCAAAAAATTGATCGAATCATGGAGAAGTTTGCTGAACGTTATTGCAAATGTAATCCAAAAGTTTTTTCCAGTGCTGATACAGCTTATGTCCTTGCTTATTCTGTGATCATGCTCAATACTGATGCTCACAATCCAATGGTGAAGAACAAGATGTCTGCTGATGATTTCATTAAAAACAATCGTGGAATAGATGATGGAAAAGATGTGCCAGAGGAATACTTGAGGTCCTTGTACGAGAGAATATCTAAAAATGAGATCAAAATGAAAGATGTTGATTTGGAAACCCAACAAAGACAAGCTGTGAATCCTAATAGACTGTTGGGTTTGGATAGTATTTTGAACATTGTGATCCGTAAGCGTGGGGAAGACAGTACTATGGGGACTAGTGATGATTTAATCCGACGTATGCAAGAACAATTCAAAGAAAAAGCTCGCAAGACAGAGTCAGTCTATTATGCTGCCACGGATGTCGTAATTCTTAGATTCATGATTGAAGCCTGCTGGGCTCCGATGTTAGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGACGAAGTTGTAATATCTCTCTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCTGTAATGTCCATGAAGACTCATAGAGATGCTTTTGTAACCTCATTGGCAAAGTTTACTTCCCTGCATTCTCCTGCTGATATTAAGCAGAAAAATGTAGACGCGATCAAGGTCATAGTTACTATTGCTGACGAGGATGGGAATTACTTACAAGAAGCATGGGAGCATATTTTGACCTGTGTTTCCCGATTTGAGCATCTACATCTTCTTGGAGAGGGCGCTCCTCCAGATGCGACATTCTTTGCTTTTCCTCAGAATGATTCTGAAAAAGCAAAGCAAGCAAAATCAACTATTCTTCCTGTCTTGAAGAAGAAGGGGCCTGGGAGAATGCAGTATGCAGCTTCCACGGTAATGAGGGGTTCATATGATAGTTCTGGAATTGGCAGTAATGCTTCTGGAGCTGTCACGTCGGAACAGGTGAACAGTCTAGTTTCTAATTTGAATATGTTGGAACAAGTTGGAAGCTCGGAAATGAACCGCATATTTACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTCTATGCAAGGTCTCCATGGAGGAATTGAGATCTCCCACTGATCCACGGGTGTTCAGTCTTACAAAAATAGTTGAGATTGCGCATTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGTATTTGGCATGTTCTCTCAGATTTCTTTGTAACCATTGGCTGTTCCGGAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTAGAGCGGGAAGAGTTGGCTAATTATAATTTTCAGAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGACGGAGTAGTGCTGTTGAAATTAGAGAACTTATCATCAGATGCGTCTCTCAAATGGTTCTATCTCGTGTGAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCGGCATATGATGACCACAGAAATATTGTACTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGTGATTACTTCCCCTACATTACCGAGACAGAAACCACCACCTTTACAGATTGTGTGAATTGTCTGATTGCATTCACCAATAGTAGATTTAACAAAGAGATTAGCTTAAATGCCATTGCTTTTCTTCGAGTCTGTGCAACTAAACTAGCAGAAGGAGACCTTGGTTTTTCATCAAGGAATAAGGACAAGGAAACTTCTGGAAAGATTTTGTCACCATCACCTCGAACAGGAAAAGAGGGAAAACTTGAAAATGGAGATTTAACAGACAAGGAAGATCATCTCTATTTCTGGTTTCCTTTATTGGCCGGTTTGTCTGAGCTTAGCTTTGATCCAAGGCCTGAGATTAGGCAGAGTGCCTTGCAAGTCCTATTTGAAACCTTACGCAATCATGGCCACCTCTTTTCATTACCTTCCCAATATTTGATTATGTACGTCATGCTATTGATCCTGCAGGAAGTAGCTCACAGATCAATGAATTGGAGATTGACGGTGAGCTTGATCAAGATGCATGGCTTTATGAAACATGCACACTAG 3819 0.4357 MKNYPRFTLEEEVDVKEKGSWEQDPKEPYTFPSRRRTNSPPSRELIAEPAVDALQKLIAHGYLRGEADPAGGCPEAKLLANLIESVCKCHDLGDDAVELLVLKSLLSAVTSISLRIHGDCLLLIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMAPVEKSDADNSITQSVQGFITKVMQDIDGVLNPATPSSRVSALGGHDGAFETTTTATVETTNPADLLDSSDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDMEIQIGNKLRRDAFLVFRALCKLSMKTPPKEASADPQLMKGKIVALELLKILLENAGAVFRTSDRMVNGLLKTAQGIPPGVTTTVLPPQEETLKLEALKCLVAVLKSMGDWMNKQLRIPEPLSSKKVEAVDNGHEAGGHPMVNGNGEESAEGSETHSEISNDASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGNSPEDIAAFLKDASGLNKTLIGDYLGERDEMSLKVMHAYVDSFDFQGMQFDEAIRVLLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIKNNRGIDDGKDVPEEYLRSLYERISKNEIKMKDVDLETQQRQAVNPNRLLGLDSILNIVIRKRGEDSTMGTSDDLIRRMQEQFKEKARKTESVYYAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVVISLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKVIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKAKQAKSTILPVLKKKGPGRMQYAASTVMRGSYDSSGIGSNASGAVTSEQVNSLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPTDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRRSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHRNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRVCATKLAEGDLGFSSRNKDKETSGKILSPSPRTGKEGKLENGDLTDKEDHLYFWFPLLAGLSELSFDPRPEIRQSALQVLFETLRNHGHLFSLPSQYLIMYVMLLILQEVAHRSMNWRLTVSLIKMHGFMKHAH 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02201 1272 Pfam Domain of unknown function (DUF1981) 1010 1092 IPR015403 -
Adu04g02201 1272 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 46 337 - -
Adu04g02201 1272 ProSiteProfiles SEC7 domain profile. 452 639 IPR000904 GO:0005085|GO:0032012
Adu04g02201 1272 Pfam Sec7 domain 460 641 IPR000904 GO:0005085|GO:0032012
Adu04g02201 1272 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 348 1253 - -
Adu04g02201 1272 MobiDBLite consensus disorder prediction 15 31 - -
Adu04g02201 1272 SMART sec7_5 456 641 IPR000904 GO:0005085|GO:0032012
Adu04g02201 1272 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 294 394 IPR032691 -
Adu04g02201 1272 Gene3D - 534 653 IPR023394 -
Adu04g02201 1272 SUPERFAMILY Sec7 domain 456 648 IPR035999 GO:0005085|GO:0032012
Adu04g02201 1272 CDD Sec7 459 641 IPR000904 GO:0005085|GO:0032012
Adu04g02201 1272 MobiDBLite consensus disorder prediction 15 43 - -
Adu04g02201 1272 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 46 337 - -
Adu04g02201 1272 Pfam Dimerisation and cyclophilin-binding domain of Mon2 46 162 IPR032629 -
Adu04g02201 1272 MobiDBLite consensus disorder prediction 415 450 - -
Adu04g02201 1272 Gene3D - 452 533 - -
Adu04g02201 1272 SUPERFAMILY ARM repeat 375 1228 IPR016024 -
Adu04g02201 1272 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 348 1253 - -
Adu04g02201 1272 MobiDBLite consensus disorder prediction 1154 1179 - -
Adu04g02201 1272 Pfam C-terminal region of Mon2 protein 1191 1252 IPR032817 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02201 Adu-Chr4 104432457 104443231 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02201 K18442 - gmx:100789988 1613.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02201 04 104432457 104443231 Adu04g02201 04 104432457 104443231 ECH
Adu04g02201 04 104432457 104443231 Adu02g02272 02 87613707 87622941 PCT