Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02272 ATGGCTTCTGCGGAAGCCGATTCCCGACTGAGTAGGATCGTCGTCCCCGCGCTCGAGGCGATCGTGAAGAACGTGTCGTGGAGGAAGCACGCAAAGCTCGCGCACGAATGCAAGTCGGTGATCGACAGGCTCAGAAATAACANNNNNNNNNNNNNNAGAAATAACAATGCAGCGGAGACGGCTGCGTCGCCGTCGGGCTCTCCTTCCGACGGCGAGCCCGATTCCACGTCGCCGGGACCCCTCCACGACGGCGGTCCCGTGGAGTACTCCTTCGCGGAGTCGGAATCGATCCTCAGTCCTCTCATCAATGCCGCGAAATCCGGCGTGCTGAAGATCGCCGAGCCCGCCGTCGACGCAATCCAGAAGCTCATCGCGTACGGCTACCTCCGCGGCGAGGCGGATCCCGGAGGCTCCTCACCGGAGGCGAAATTGCTATCGAATATGATCGAATCGGTTTGCAAGTGCAATGAGTTAGGAGACGAAACAATGGAGTTGCAGGTTCTGAAAACGCTGTTGTCCGCGGTAACCTCAATTTCGTTGCGAATTCACGGTGATTGCTTGCTTATGATAGTGCGAACCTGTTATGATTTATATCTAACGAGTAAAACTGCGGTGAATCAAACAACGGCGAAAGCCTCGTTGATTCAGATGCTGGTGATTGTGTTTAGGAGAATGGAAGCGGATTCTTCCACGGTTCCTATTCAGCCGATTGTGTTGGCTGATTTGATGGAGCCAGCAGAAAAATCTGATTCTTCCACGCAGTTTGTGCAAGGTTTTATCACCAAGATTATGCAGGACATTGATGGTGTTTTGAACCCTGGTACACCTAGTGCTAAGGTTTCGATGCTAGGTGGCCATGATGGTGCGTTTGAGACTACGGCGACGGTGGAGGGGACAAACCCGACGGATTTGTTGGATTCGACTGATAAGGACATGTTGGATGCGAAGTATTGGGAGATCAGTATGTATAAGACGGCTCTAGAAGGGAGGAAGGGAGAGCTTGTGGATGGTGGGCACTCGAACGCTGGAGCTGTTTTCAGGACTAGTGAAAGGTTTCTAGGTGCCATCAAGCAGTACTTATGTTTATCATTGTTGAAGAACAGTGCTTCAACTCTTTTGATCGTTTTTCAGCTATCTTGCTCCATCTTCATCAGTCTGGTATCAAGATTTAGAGCTGGATTGAAGGCCGAAATTGGTGTTTTTTTCCCTATGATAATACTCAGGGTACTAGAAAATGTTTCTCAACCTAATTTTCAGCAAAAGATGATAGTGCTTCGGTTTCTGGAGAAACTTTGCATTGATTCACAGATATTGGTCGACATATTTATCAACTATGATTGTGACGTCAATTCATCCAACATTTTCGAGAGGATGGTCAATGGACTTCTTAAGACTGCTCAAGGTGTCCCTCCTGGTGCAGCCACCACACTTCTGCCACCTCAAGAGGCAACACTAAAACTTGAAGCCATGAAAACCTTGGTTGCTGTTTTAAAATCAATGGGAAGCTGGCTGAACAAACAATTGCTAATTCCAGATCTTCATTCTGCTAAGAAAATTGAAGCAGCTGACAGCAGTGCTGAGGCTGGAGGTTTGACCATGGTAAATGGAAATGGAGAAGATCCAGTTGGACAAGACTCTCCACCTGAAATCTCAAATGATGCATCTGATGTTTCAAATATTGGGCAGCGACGGGCTTATAAACTGGAACTTCTGGAAGGTATATCACTTTTTAATAGGAAACCTAAGAAAGGAATCGAGTTCCTCATCAATGCCAAAAAAGTGGGTAATTCACCAGAGGATATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTTTCTGGGAGAAAGGGAAGAATTATCCTTGAAGGTTATGCATGCCTATGTGGATTCATTTGACTTCCAAGGGATGGAGTTTGATGAGGCAATCAGGGTCTTTCTTCTAGGCTTTCGACTGCCTGGTGAGGCACAGAAGATTGATCGGATCATGGAAAAGTTTGCTGAACGTTATTCCAAATGTAATCCAAAGGCCTTTTCTAGTGCCGACACAGCCTATGTCCTTGCTTATTCTGTAATATTGCTCAACACAGATGCTCACAATCCTATGGTGAAGAACAAGATGTCTGTCGATGATTTCATAAGAAACAATCGTGGCATTGATGATGGAAAAGATCTCCCCGAGGAGTATTTGAGGTCCTTGTTTGAGAGAATATCCAGAACTGAGATCAAAATGAAAGATGACAATATGGTTCCGCAACAAAAACAGGCTGCAAACTCTAATAGACTTTTAGGATTGGATAGTATATTGAATATTGTGACCAACAAGCATTGGGAAGACAGCCATATGGAAACCAGTGATGATCTTATCCGTCATATGCAACAACAATTCAAAGAAAAAGCTCGCAAATCCGAGTCGGTCTATTATGCGGCAACAAATGTTGTAATCCTTAGATTCATGATTGAGGTGTGTTGGGCACCAATGTTAGCTGCCTTCAGCGTTCCTCTTGATCAAAGTGATGATGAAGTTATAATATCTCTCTGTCTCGAGGGCTTCCGCTATGCTATTCATGTTACTTGTGGAACGTCCATGAAGACACATCGAGATGTTTTTGTGACTTCACTAGCAAAGTTTACCTCTCTGCATTCTCCTGCTGCCATTAAGCAAAAAAATGTAGATGCAATTAAGGCAATAGTTACTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAGCATATCTTGACCTGTGTTTCCCGGTTTGAGCATCTACTTCTTCTCGGAGAGGGCGCTCCACCAGACGCTACATTCTTTTCCTTTCCTCAGAATGAGTCAGAAAAGGCAAAGCAAACGAAATCAACCATTCTTCCTGTTTTGAAAAAGAAGGGACCTGGTAGGTTACAGTATGCTGCTGCCACATTGATGCGAGGTTCATATGACAGTGCTGGAATTGGTGGCAATGCTTCTGGAACCATCACATCAGAACAGGTGAACAATATAGTTTCTAATTTGCACATGTTGGAACAAGTTGGAAGCTCTGAAATGAATCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAGTAGATTTTGTTAAGGCTCTGTGCAAGGTCTCCATGGACGAACTAAGATCTCCGTCTGATCCCCGAGTTTTCAGCCTCACAAAGATAGTTGAGATTGCGCACTATAATATGGACCGCATCAGGCTTGTGTGGTCGAGCATCTGGCATGTTCTCTCTGATTTCTTTGTGACTATTGGCTGTTCTGGAAACCTTTCAGTTGCAATTTTTGCGATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTGGAGCGGGAAGAGTTGGCTAATTACAATTTTCAAAATGAATTTATGAAGCCTTTTGAAATTGTCATGCAAAAGAGTAGTGCTGTTGAGATCAGAGAACTAATTATCCGATGTGTCTCTCAGATGGTTTTATCTCGTGTCAAAAATGTCAAATCTGGATGGAAGAGCATGTTCACGGTATTCACTACAGCAGCATATGATGACCATAAGAACATTGTATTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGAGATTATTTTCCATACATTACTGAGACAGAGACCACCACATTCACTGACTGTGTGAATTGTCTAATTGCTTTTACAAATACTAGATTCAACAAAGAGATTAGCCTAAATGCCATTGCTTTTCTTCGGTTCTGCGCAACCAAACTAGCCGAAGGAGACCTTGGTTCATCATCAAGAAATAAGGATAAGGAAGTCTCCAGAAAGGCTTCCCCGCGTTCACCTCAAACAGGAAAAGAGGGGAAACAAGACAATGGAGAGGTGACTCAAAAGGAGGATCATCTCTATTTTTGGTTTCCTCTATTGGCTGGATTATCTGAGCTTAGTTTTGATCCAAGGCCTTTTTATCTTTTTATCAACTTTTACAACACTGTCAATCCACTTTTAAGAAAGGTCCTGATGCTACTGGTAAGCTTTATACAGCGCCCTCATCAAAACCTTGCTGGCATCGGTATTGCTGCATTTGTACGTTTGATGAGTAATGCTGGGGAGCTATTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTGTCGCTAAAAGAAGCAGCTATTGCAACTCTCCCTGACTTCTCATTCTTTGAAAATGAAGACTTTGTGAATAGAAATTATGAACATGCACCAACAGCTGAAGATGATGGAGATCTTCCTGACTCGGCGTCACCTGAAACTTTAGCAAACCTGAGGACTCGTCATCTTTTTGCGTATTTGTCTGATGCAAAAAGCCGAGCTGCTGTTGAGCTTTTGTTGATTCAGGCAGTGATGGAGATATATAACATGCATCGATTTCGCCTTTCAGCAAAACACATGCTAGTCCTGTTTGATGCATTGCATGAGGTGGCATTACATGCTCACAAGATTAACAGTGATACTACTTTACGTTCAAAGCTTCAAGAGTTTGGTTCCATGACCCAAATGCAAGACCCTCCATTATTACGACTTGAGAATGAGTCGTACCAAATATGCCTTACATTTTTACAGAACCTCATTATTGACAGGCCTTATAGTTATGAGGAGACTGAGGTTGAATCTCATCTTGTTCGGCTATGCCAGGAGATCTTAGAGTTTTATATTGTAGTTGCAAGTTCTGGATTTACAACTCAGCCTTCTCGTGACAGACAGCCACATTGGTTAATTCCATTAGGGTCTGGGAAGCGGAGAGAACTGGCTACACGTTCACCTCTTGTCGTGGCTACGCTTGAGGCTATTTGTAGTTTAGGAGATGCTTCATTTGAGAAGAACCTCTCTAATTTTTTCCCTCTCCTTTCAAGCTTGGCAAGTTGCGAACATGGTACGCACGAAGTCCAGGTTGCTCTCTGTGATATGCTCAGTTTATCAGTTGGTCCTGTTCTGCTGAAGTCATGTTGA 4965 0.4348 MASAEADSRLSRIVVPALEAIVKNVSWRKHAKLAHECKSVIDRLRNNXXXXXRNNNAAETAASPSGSPSDGEPDSTSPGPLHDGGPVEYSFAESESILSPLINAAKSGVLKIAEPAVDAIQKLIAYGYLRGEADPGGSSPEAKLLSNMIESVCKCNELGDETMELQVLKTLLSAVTSISLRIHGDCLLMIVRTCYDLYLTSKTAVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVLADLMEPAEKSDSSTQFVQGFITKIMQDIDGVLNPGTPSAKVSMLGGHDGAFETTATVEGTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGGHSNAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIILRVLENVSQPNFQQKMIVLRFLEKLCIDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGAATTLLPPQEATLKLEAMKTLVAVLKSMGSWLNKQLLIPDLHSAKKIEAADSSAEAGGLTMVNGNGEDPVGQDSPPEISNDASDVSNIGQRRAYKLELLEGISLFNRKPKKGIEFLINAKKVGNSPEDIAAFLKDASGLNKTLIGDFLGEREELSLKVMHAYVDSFDFQGMEFDEAIRVFLLGFRLPGEAQKIDRIMEKFAERYSKCNPKAFSSADTAYVLAYSVILLNTDAHNPMVKNKMSVDDFIRNNRGIDDGKDLPEEYLRSLFERISRTEIKMKDDNMVPQQKQAANSNRLLGLDSILNIVTNKHWEDSHMETSDDLIRHMQQQFKEKARKSESVYYAATNVVILRFMIEVCWAPMLAAFSVPLDQSDDEVIISLCLEGFRYAIHVTCGTSMKTHRDVFVTSLAKFTSLHSPAAIKQKNVDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLLLLGEGAPPDATFFSFPQNESEKAKQTKSTILPVLKKKGPGRLQYAAATLMRGSYDSAGIGGNASGTITSEQVNNIVSNLHMLEQVGSSEMNRIFTRSQKLNSEAIVDFVKALCKVSMDELRSPSDPRVFSLTKIVEIAHYNMDRIRLVWSSIWHVLSDFFVTIGCSGNLSVAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFEIVMQKSSAVEIRELIIRCVSQMVLSRVKNVKSGWKSMFTVFTTAAYDDHKNIVFLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNTRFNKEISLNAIAFLRFCATKLAEGDLGSSSRNKDKEVSRKASPRSPQTGKEGKQDNGEVTQKEDHLYFWFPLLAGLSELSFDPRPFYLFINFYNTVNPLLRKVLMLLVSFIQRPHQNLAGIGIAAFVRLMSNAGELFSDEKWLEVVLSLKEAAIATLPDFSFFENEDFVNRNYEHAPTAEDDGDLPDSASPETLANLRTRHLFAYLSDAKSRAAVELLLIQAVMEIYNMHRFRLSAKHMLVLFDALHEVALHAHKINSDTTLRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLIIDRPYSYEETEVESHLVRLCQEILEFYIVVASSGFTTQPSRDRQPHWLIPLGSGKRRELATRSPLVVATLEAICSLGDASFEKNLSNFFPLLSSLASCEHGTHEVQVALCDMLSLSVGPVLLKSC 1654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02272 1654 Gene3D - 559 640 - -
Adu02g02272 1654 SMART sec7_5 563 748 IPR000904 GO:0005085|GO:0032012
Adu02g02272 1654 Coils Coil 53 61 - -
Adu02g02272 1654 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 340 454 IPR032691 -
Adu02g02272 1654 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 1318 1647 - -
Adu02g02272 1654 SUPERFAMILY ARM repeat 373 1643 IPR016024 -
Adu02g02272 1654 Pfam Domain of unknown function (DUF1981) 1117 1199 IPR015403 -
Adu02g02272 1654 MobiDBLite consensus disorder prediction 530 556 - -
Adu02g02272 1654 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 228 IPR032629 -
Adu02g02272 1654 ProSiteProfiles SEC7 domain profile. 559 746 IPR000904 GO:0005085|GO:0032012
Adu02g02272 1654 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 9 338 - -
Adu02g02272 1654 SUPERFAMILY Sec7 domain 563 753 IPR035999 GO:0005085|GO:0032012
Adu02g02272 1654 MobiDBLite consensus disorder prediction 1259 1286 - -
Adu02g02272 1654 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 349 1315 - -
Adu02g02272 1654 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 338 - -
Adu02g02272 1654 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 349 1315 - -
Adu02g02272 1654 Pfam BIG2 C-terminal domain 1445 1642 IPR046455 -
Adu02g02272 1654 CDD Sec7 566 748 IPR000904 GO:0005085|GO:0032012
Adu02g02272 1654 Pfam Sec7 domain 568 748 IPR000904 GO:0005085|GO:0032012
Adu02g02272 1654 MobiDBLite consensus disorder prediction 50 88 - -
Adu02g02272 1654 MobiDBLite consensus disorder prediction 50 74 - -
Adu02g02272 1654 Gene3D - 641 760 IPR023394 -
Adu02g02272 1654 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 1318 1647 - -
Adu02g02272 1654 Coils Coil 34 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02272 Adu-Chr2 87613707 87622941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02272 K18442 - egr:104444341 1993.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02201 04 104432457 104443231 Adu02g02272 02 87613707 87622941 PCT