Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01196 ATGGCCGTTTCAATGAGAGATGTGGATCCAGCTTTCCAGGGGGCTGGACAAAAGGCTGGACTCGAAGTATGGCGTATTGAGGATTTTAATCCAGTTCCTGTCCCCAAGTCCTCTTTCGGGAAGTTTTTCACTGGGGACTCCTATGTGATCTTAAAGACAACTTCGTCAAAAAGTGGTGCTCTTCGGCATGATATCCATTATTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGCTAGATGCAGCTCTTGGAGGACGAGCTGTTCAATATCGTGAAGTACAGGGCCATGAAACTGAAAAGTTCCTGTCTTATTTCAAACCATGTATTATACCGCTAGAAGGTGGAGTTGCTTCTGGTTTCAAACATACTGAGGCAGAGAAACACAAGACACGATTGTTTGTATGCAGAGGGAAACATGTTGTACATGTCAAAGAGGTTCCATTTGCTCGATCTTCACTCAACCATGATGATATTTTTGTTCTTGATACGGAGTCAAAAATCTTCCAATTTAACGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCATGAGGGAAAATGTGAGGTAGCTGCTATTGAGGATGGAAAATTGATGGCTGATCCTGAAACTGGAGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCACGCAAAACTGTTGGCGAAGATGAAAAGCCTGCTGATTCTCGCCCACCAAAGCTGCTTTGTGTTGAAAAAGGACAGGCAGAACTTGTTGAAACTGATTCTTTGAAAAGAGAATTACTGGATACAAATAAATGCTATATTCTGGACTGTGGGTTGGAGGTGTTTGTCTGGATGGGAAGAAACACCTCCCTTGATGAAAGGAAAAGTGCAAGTGGAGTAGCAGATGATTTAGTCAGTGGCACTGATAAATTGAAACCTCAAATAATTCGTATAATTGAAGGATTTGAAACAGTAATGTTCAGATCCAAGTTTGATTCTTGGCCTCAGATCACTGATGTAACCGTTTCTGAAGATGGACGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGAGTGAATGTCAAGGGTCTCTTGAAAGCTGATACAGTAAAGGAAGAACCTCAACCTTACATTGATTGCACAGGACATTTGCAGGTTTGGCGTGTGAATGGTCAGGAAAAGATCCTTCTTCAAGCCTCTGATCAGTCAAAATTTTATAGTGGGGATTGCTACATCTTTCAGTATACATACCCTGGAGAAGATAAAGAAGATTGTCTTATAGGGACATGGATTGGAAAGAATAGTGTTGAGGAAGATAGAGCTTCAGCAAATTCCTTGGCTAGCAAAATGGTTGAGTCAATGAAGTTCCTGGCATCCCAGGCACGTATATATGAAGGCAATGAACCCATTCAATTTCATACTATACTACAAACATTAATTGTTTTGAAGGGTGGACTTAGTGATGGATACAAGACTCACGTTGCAGAAAAAGAAATTCAAGATGAGACATATAAAGAGGATGGTGTTGCACTATTCCGCATCCAGGGCTCTGGACCAGACAACATGCAAGCTATACAAGTTGACTCAGTTGCATCCTCCTTGAATTCCTCTTATTGTTACATACTTCATAATGGGCCTGCTGTCTTTACATGGTCTGGAAGTGCTACAACTGCAACAGACCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCCAAACCACAAAGGGAAGGTACAGAATCTGAACAATTTTGGGAATTGTTAGGAGGAAAATCAGAATATCCGAGCCAAAAGATCACTAGGGAGGCTGAAAGTGATCCTCACTTATTTTCTTGCAACTTCTCAAAAGGAAATTTGAAGGTGACAGAGGTGTACAACTTTTCCCAGGATGATTTGATGACAGAAGACATTTTCATTTTGGATTGTCACTCGGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGATCCCAAGAGTAGAATGCAGGCTCTGACAATTGGTGAGAAATTTCTTGAGCACGACTTTCTCCTGGAGAAGTTATCTCATGTGGCTCCAGTATATGTTATCAATGAAGGGAGTGAGCCACCGTTCTTCACTCGCTTCTTTAAATGGGATTCTGGAAAATCTGCAATGCTCGGAAATTCATTTCAGAGGAAGCTTACAATAGTGAAAAATGGAGGTGCTCCACTTCTGGATAAACCCAAGCGGAGAACACCTGCATCTTATGGGGGAAGGTCTAGTAGTGTGCCTGATAAAACTCAGCGTTCTTCCCGCAGCATGTCTGTTAGTCCTGATCGAGTACGTGTGAGGGGCAGGTCTCCAGCTTTTAATGCACTTGCAGCTAATTTTGAGAACCCTAATGCCAGGAATCTCTCAACTCCGCCGCCAGTAGTTCGAAAGCTGTATCCAAAATCTGTCACGCCAGATTCTGCAAAAGCAGCACCAAAATCTGCTGCCATAGCTGCTCTTAGCTCTAGTTTTGAACAACCACCTTCAGCACGAGAAAGTATGATACCTAGGTCAGTTAAAGTGAGCCTTTCTACTAACAAATCAAATCCCGAGACAAATGACAAGGACAAGGAGAGAGAGAATTCTGTGACCAATAAAGTGGAATCCCTATCCATAAAAGAAGATGCTAAAGAGGATGAAGCTGAAGATGAAGAAGGCCTCTTGATATACCCATATGAACGCCTCAAGATAACATCTACGGATCCTGTAACAGACATTGATGTGACTAAACGTGAGACTTACCTATCATCTGCGGAGTTCAAAGAGAAATTTGGGATGACAAAGGATGCATTTTACAAGTTGCCCAAATGGAAACAGAACAAACTTAAAATGGCTGTTCAGTTATTCTGA 2901 0.4212 MAVSMRDVDPAFQGAGQKAGLEVWRIEDFNPVPVPKSSFGKFFTGDSYVILKTTSSKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPLEGGVASGFKHTEAEKHKTRLFVCRGKHVVHVKEVPFARSSLNHDDIFVLDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEVAAIEDGKLMADPETGEFWGFFGGFAPLPRKTVGEDEKPADSRPPKLLCVEKGQAELVETDSLKRELLDTNKCYILDCGLEVFVWMGRNTSLDERKSASGVADDLVSGTDKLKPQIIRIIEGFETVMFRSKFDSWPQITDVTVSEDGRGKVAALLKRQGVNVKGLLKADTVKEEPQPYIDCTGHLQVWRVNGQEKILLQASDQSKFYSGDCYIFQYTYPGEDKEDCLIGTWIGKNSVEEDRASANSLASKMVESMKFLASQARIYEGNEPIQFHTILQTLIVLKGGLSDGYKTHVAEKEIQDETYKEDGVALFRIQGSGPDNMQAIQVDSVASSLNSSYCYILHNGPAVFTWSGSATTATDQELVERMLDLIKPNLQSKPQREGTESEQFWELLGGKSEYPSQKITREAESDPHLFSCNFSKGNLKVTEVYNFSQDDLMTEDIFILDCHSEIFVWVGQQVDPKSRMQALTIGEKFLEHDFLLEKLSHVAPVYVINEGSEPPFFTRFFKWDSGKSAMLGNSFQRKLTIVKNGGAPLLDKPKRRTPASYGGRSSSVPDKTQRSSRSMSVSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPVVRKLYPKSVTPDSAKAAPKSAAIAALSSSFEQPPSARESMIPRSVKVSLSTNKSNPETNDKDKERENSVTNKVESLSIKEDAKEDEAEDEEGLLIYPYERLKITSTDPVTDIDVTKRETYLSSAEFKEKFGMTKDAFYKLPKWKQNKLKMAVQLF 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01196 966 Pfam Gelsolin repeat 150 216 IPR007123 -
Adu04g01196 966 Pfam Gelsolin repeat 265 337 IPR007123 -
Adu04g01196 966 Pfam Gelsolin repeat 29 111 IPR007123 -
Adu04g01196 966 Pfam Gelsolin repeat 410 479 IPR007123 -
Adu04g01196 966 Pfam Gelsolin repeat 637 712 IPR007123 -
Adu04g01196 966 SMART VILL_6 519 606 IPR007122 GO:0051015
Adu04g01196 966 SMART VILL_6 137 234 IPR007122 GO:0051015
Adu04g01196 966 SMART VILL_6 254 344 IPR007122 GO:0051015
Adu04g01196 966 SMART VILL_6 392 489 IPR007122 GO:0051015
Adu04g01196 966 SMART VILL_6 19 117 IPR007122 GO:0051015
Adu04g01196 966 SMART VILL_6 622 719 IPR007122 GO:0051015
Adu04g01196 966 MobiDBLite consensus disorder prediction 741 782 - -
Adu04g01196 966 Pfam Villin headpiece domain 931 966 IPR003128 GO:0003779|GO:0007010
Adu04g01196 966 CDD gelsolin_S5_like 517 608 - -
Adu04g01196 966 MobiDBLite consensus disorder prediction 867 893 - -
Adu04g01196 966 Gene3D Severin 133 247 IPR029006 -
Adu04g01196 966 CDD gelsolin_S2_like 138 223 - -
Adu04g01196 966 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Adu04g01196 966 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Adu04g01196 966 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Adu04g01196 966 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Adu04g01196 966 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Adu04g01196 966 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Adu04g01196 966 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Adu04g01196 966 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Adu04g01196 966 Gene3D Severin 380 521 IPR029006 -
Adu04g01196 966 MobiDBLite consensus disorder prediction 840 896 - -
Adu04g01196 966 Gene3D Severin 613 733 IPR029006 -
Adu04g01196 966 Gene3D Severin 522 612 IPR029006 -
Adu04g01196 966 ProSiteProfiles Headpiece (HP) domain profile. 901 966 IPR003128 GO:0003779|GO:0007010
Adu04g01196 966 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Adu04g01196 966 Gene3D Severin 7 132 IPR029006 -
Adu04g01196 966 CDD gelsolin_S4_like 386 482 - -
Adu04g01196 966 PANTHER VILLIN-3-LIKE 1 966 - -
Adu04g01196 966 SMART VHP_1 931 966 IPR003128 GO:0003779|GO:0007010
Adu04g01196 966 Gene3D Villin headpiece domain 904 966 IPR036886 GO:0003779|GO:0007010
Adu04g01196 966 SUPERFAMILY VHP, Villin headpiece domain 894 966 IPR036886 GO:0003779|GO:0007010
Adu04g01196 966 CDD gelsolin_S3_like 254 343 - -
Adu04g01196 966 Gene3D Severin 248 355 IPR029006 -
Adu04g01196 966 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Adu04g01196 966 SUPERFAMILY Actin depolymerizing proteins 137 238 - -
Adu04g01196 966 CDD gelsolin_S1_like 12 124 - -
Adu04g01196 966 SUPERFAMILY Actin depolymerizing proteins 511 615 - -
Adu04g01196 966 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 255 427 IPR036180 -
Adu04g01196 966 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Adu04g01196 966 PANTHER VILLIN 1 966 IPR007122 GO:0051015
Adu04g01196 966 MobiDBLite consensus disorder prediction 755 777 - -
Adu04g01196 966 CDD gelsolin_S6_like 621 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01196 Adu-Chr4 25955853 25968526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01196 - - adu:107483828 1891.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01196 04 25955853 25968526 Adu01g02140 01 88679953 88687820 PCT