Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02140 ATGGCTGTTTCAATGAAAGATTTGGATCCAGCTTTCAAAGGAGCTGGACAGAAGGATGGACTTGAAATTTGGCGTATTGAGAATTTTAATCCAGTTCCCATCCCTGAGTCTTCTCATGGGAAGTTTTACACTGGTGACTCATATGTGATCTTAAAGACAACTGCTTCAAAAAGCGGTGCTCTACGCCATGATATCCATTTCTGGCTTGGAAAAGACACCAGTCAGGATGAAGCTGGTACTGCAGCTATAAAAACAGTGGAGTTGGATGCAACTCTAGGAGGACGTGCTGTTCAGTATCGTGAGGTGCAAGGTCACGAAACTGAAAAGTTCCTGTCTTATTTCAAACCATGCATTATACCACAAGAAGGTGGAATTGCCTCTGGTTTCAACCATGCTGAGGCTGAAGAATATAAGACACGGTTGTTTGAGGTCAAAGGAAAACATGTTGTACACGTTAGAGAGGTTCCTTTTGCTCGATCTTCTCTCAACCATGATGATGTTTTTATTCTGGATACTGAGTCCAAAATATTCCAATTTAATGGTTCCACTTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTGCAGTATATTAAGGATACTTACCATGATGGCAAATGTGACATAGCTGCTATTGAGGATGGAAAGTTGATGGCTGATGCTGAAAGTGGAGAATTCTGGGCTTTATTTGGAGGCTTTGCTCCTCTTCCACGAAAAGGCGCTAGTGATGATGCTAAACATGGTTCTCATCCTCTAAAGCTGCTTCGTGTTGAAAAAGGGAAGGCAGAACCAATTGAAGCTGATTCTTTGACAAGGGAGTTACTTGAAACAAAAAAATGCTATATTCTAGATTGTGGGTTGGAAGTGTTTATATGGATGGGAAGAAACACTTCTCTTGATGCAAGAAAAAGCGCAGGTGTATCTGCAGAAGAGTTACTCAATAGCACCGACCGACCAAAATCCCAGATAATTCGTATAATTGAAGGATTTGAAACAGTGATGTTCAAGTCCAAGTTTGATTCTTGGCCTGAGACAACTAATGTGCAAAATTCCGAAGATGGACGCGGCAAGGTGGCAGCACTTCTAAAACGTCAAGGAGTGGATGTAAAGGGTCTATTGAAAGCTGAGCCAGTAAAAGAAGAACCTAAACCGCACATTGATTGCACAGGACATTTGCAGGTTTGGCGCGTAAACGGTCAGGAAAAAATTTCCCTACCAGACTCTGAACTTTCAAAGTTTTATAGTGGAGATTGCTATATATTTCAGTATACATATAACGGAGATGATAGGGAAGAGTGTCTCATAGGAGCATGGATGGGAAATAATAGTGTTGAGGGAGATAGAACTACAGCTCTTTCAATGGGCTGCAAAATGGTTGAGTCAATGAAGTTTATCCCTTCCATGGCACGTATCTATGAGGGCAGTGAACCAATTCAATTTCATGCTATCATGCAAACTTTCATCGTTTTTAAGGGTGGACTTAGTGATGGATACAAGAATCACATTGCAGAAAAGGGAATTCCAGATGAGACATACAAAGAGGCTGGTGTTGCATTATTCCGCATCCAGGGCTCTGATCCGGAAAATATGCAAGCTATACAAGTTGAACCAGTTGCTTCCTCCTTGAATTCCTCCCATTGCTACATACTTCATAGTGAAACCGCCCTCTTTAGTTGGTCTGGAAGTTTAACAACATCAGAAGACCATGAACTTGTTGAGAGAATGCTGGATTTCATAAAGCCAGAGTTACAACCCAAATCACATAAGGAAGGTATAGAATCTGAACAGTTTTGGGAATTATTGGGAGGAAAAACAGAATATCCAAGTCAAAAGATTGTGAGGGGCAAGGAGCATGACCCTCACCTATTTTCTTGTCACTTCTCAAAAGGTAAGGACTATTTTCTTGGATGTTTGCAGGTGAAAGAGATATACAATTTTTCCCAGGATGATCTGATGACAGAAGATATATTCATCTTGGATTGTCACTCTGAAATCTTTGTCTGGGTTGGCCAGGGAGTTGACCCCAAGAGCAGAATGCAGTCTCTAACCATTGGTGAGAAATTTATTGAGCATGATTTTCTTCTAGAAAAATTATCTCGGACCACTCCAATGTTTATTGTTATGGAAGGTAGCGAGCCACCGTTCTTCACTTGTTTCTTCAAATGGGAGGCTGCAAAAGCTGCAATGCTTGGAAATTCATTTCAAAGGAAGCTTACAATCTTGAGAAATGGGGGTACTCCACCAGTGGTTAAACCAAAACGAAGACCATCTTTACAATATGGTGATAAGTGCCAGCGTTCCTCGCGCAGCATGTCTGTTAGTCCTACTCCTGAACGTGTTCGTGTCAGGGGCCGGTCGCCAGCATTTAACGCCATAGCATCCACTTTTGAGAAGCCTAAAGATAGGAACCTTTCAACCCCACCTCCAATTGTGAGAAAAGTGTATCCAAAATCAGGGACAGCAAACTTGAATACTCTTTCTCTTGGTCTTGGATCTAAGTCTTCAGCCATAGCTCGGCTTACTTCTAGTTTTGAAATGCCTTCAGCTCGGGGAAAGTTGATACCTCAGTCGCTTAGAGTGACTTCAAATACACTCAAATCAAACCCAGAAAGAAGTGATAGTGAGGATTCTATGAGCAGCAGATTAGAATCTCTTACAGAGGAAGATGCAAAAGAAGGTGAAGCTGACGATGATGAAGGACTCCCAGTTTATCCGTATGATAGCGTTAACACAGCTTCTACCAATCCAGTACCAGACATTGATGTGACTAAACGAGAGGCTTATCTGTCAGCTACAGAGTTCAAAGAAAAACTTGGCATGACGAAGACTGAATTTTACAATTCAAGTTGCAGTGATAAACTGGCATGGATTGAAAGGGACAGCATCAGTGTTTTTTAA 2901 0.415 MAVSMKDLDPAFKGAGQKDGLEIWRIENFNPVPIPESSHGKFYTGDSYVILKTTASKSGALRHDIHFWLGKDTSQDEAGTAAIKTVELDATLGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFNHAEAEEYKTRLFEVKGKHVVHVREVPFARSSLNHDDVFILDTESKIFQFNGSTSSIQERAKALEVVQYIKDTYHDGKCDIAAIEDGKLMADAESGEFWALFGGFAPLPRKGASDDAKHGSHPLKLLRVEKGKAEPIEADSLTRELLETKKCYILDCGLEVFIWMGRNTSLDARKSAGVSAEELLNSTDRPKSQIIRIIEGFETVMFKSKFDSWPETTNVQNSEDGRGKVAALLKRQGVDVKGLLKAEPVKEEPKPHIDCTGHLQVWRVNGQEKISLPDSELSKFYSGDCYIFQYTYNGDDREECLIGAWMGNNSVEGDRTTALSMGCKMVESMKFIPSMARIYEGSEPIQFHAIMQTFIVFKGGLSDGYKNHIAEKGIPDETYKEAGVALFRIQGSDPENMQAIQVEPVASSLNSSHCYILHSETALFSWSGSLTTSEDHELVERMLDFIKPELQPKSHKEGIESEQFWELLGGKTEYPSQKIVRGKEHDPHLFSCHFSKGKDYFLGCLQVKEIYNFSQDDLMTEDIFILDCHSEIFVWVGQGVDPKSRMQSLTIGEKFIEHDFLLEKLSRTTPMFIVMEGSEPPFFTCFFKWEAAKAAMLGNSFQRKLTILRNGGTPPVVKPKRRPSLQYGDKCQRSSRSMSVSPTPERVRVRGRSPAFNAIASTFEKPKDRNLSTPPPIVRKVYPKSGTANLNTLSLGLGSKSSAIARLTSSFEMPSARGKLIPQSLRVTSNTLKSNPERSDSEDSMSSRLESLTEEDAKEGEADDDEGLPVYPYDSVNTASTNPVPDIDVTKREAYLSATEFKEKLGMTKTEFYNSSCSDKLAWIERDSISVF 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02140 966 SUPERFAMILY Actin depolymerizing proteins 594 722 - -
Adu01g02140 966 SUPERFAMILY Actin depolymerizing proteins 223 347 - -
Adu01g02140 966 Gene3D Villin headpiece domain 902 950 IPR036886 GO:0003779|GO:0007010
Adu01g02140 966 Gene3D Severin 614 734 IPR029006 -
Adu01g02140 966 ProSiteProfiles Headpiece (HP) domain profile. 899 964 IPR003128 GO:0003779|GO:0007010
Adu01g02140 966 CDD gelsolin_S6_like 620 724 - -
Adu01g02140 966 SMART VILL_6 251 343 IPR007122 GO:0051015
Adu01g02140 966 SMART VILL_6 137 234 IPR007122 GO:0051015
Adu01g02140 966 SMART VILL_6 622 724 IPR007122 GO:0051015
Adu01g02140 966 SMART VILL_6 19 117 IPR007122 GO:0051015
Adu01g02140 966 SMART VILL_6 391 488 IPR007122 GO:0051015
Adu01g02140 966 SMART VILL_6 518 605 IPR007122 GO:0051015
Adu01g02140 966 PANTHER VILLIN 1 948 IPR007122 GO:0051015
Adu01g02140 966 Gene3D Severin 379 512 IPR029006 -
Adu01g02140 966 MobiDBLite consensus disorder prediction 870 889 - -
Adu01g02140 966 SUPERFAMILY Actin depolymerizing proteins 509 613 - -
Adu01g02140 966 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Adu01g02140 966 CDD gelsolin_S3_like 254 342 - -
Adu01g02140 966 Pfam Gelsolin repeat 150 205 IPR007123 -
Adu01g02140 966 Pfam Gelsolin repeat 645 717 IPR007123 -
Adu01g02140 966 Pfam Gelsolin repeat 28 111 IPR007123 -
Adu01g02140 966 Pfam Gelsolin repeat 267 336 IPR007123 -
Adu01g02140 966 Gene3D Severin 6 132 IPR029006 -
Adu01g02140 966 Gene3D Severin 516 612 IPR029006 -
Adu01g02140 966 CDD gelsolin_S4_like 387 485 - -
Adu01g02140 966 SUPERFAMILY Actin depolymerizing proteins 129 243 - -
Adu01g02140 966 Gene3D Severin 133 245 IPR029006 -
Adu01g02140 966 PANTHER VILLIN-4 1 948 - -
Adu01g02140 966 CDD gelsolin_S5_like 516 607 - -
Adu01g02140 966 SUPERFAMILY VHP, Villin headpiece domain 892 948 IPR036886 GO:0003779|GO:0007010
Adu01g02140 966 MobiDBLite consensus disorder prediction 856 903 - -
Adu01g02140 966 CDD gelsolin_S1_like 12 124 - -
Adu01g02140 966 SUPERFAMILY Actin depolymerizing proteins 382 527 - -
Adu01g02140 966 MobiDBLite consensus disorder prediction 746 780 - -
Adu01g02140 966 CDD gelsolin_S2_like 138 232 - -
Adu01g02140 966 PRINTS Gelsolin family signature 322 343 IPR007122 GO:0051015
Adu01g02140 966 PRINTS Gelsolin family signature 410 426 IPR007122 GO:0051015
Adu01g02140 966 PRINTS Gelsolin family signature 531 551 IPR007122 GO:0051015
Adu01g02140 966 PRINTS Gelsolin family signature 468 488 IPR007122 GO:0051015
Adu01g02140 966 PRINTS Gelsolin family signature 591 610 IPR007122 GO:0051015
Adu01g02140 966 PRINTS Gelsolin family signature 435 453 IPR007122 GO:0051015
Adu01g02140 966 PRINTS Gelsolin family signature 649 671 IPR007122 GO:0051015
Adu01g02140 966 MobiDBLite consensus disorder prediction 762 776 - -
Adu01g02140 966 Gene3D Severin 246 360 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02140 Adu-Chr1 88679953 88687820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02140 - - gmx:100807762 1442.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02140 01 88679953 88687820 Adu01g02140 01 88679953 88687820 ECH
Adu04g01196 04 25955853 25968526 Adu01g02140 01 88679953 88687820 PCT