Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02405 ATGGGTTCTTGGATTGTTCAGCTTCTTATGCTATTGCGCTTATTGAGCTTTGTGAACTCACAGGTTGAAACTGGTGGGGATTCACATTTAAAAGGGATTGTTGCCATTAATGCGAAATCGGTAATTGGAACCATTGATGATGATTTTGTGTGTGCAACTCTTGATTGGTGGCCCCCTCAGAAATGTGACTATGGTAGATGCAGTTGGGGCCTTGCATCTCTTCTCAATCTGGACCTCAACAATCAGCTCCTCTTAAATGCAGTGAAAGAGTTTTCGCCGTTGAAACTTAGATTGGGTGGCAGTTTGCAAGATAAGGTCATATATGGGACTGAAGACTATAACAAACCTTGTACTCCTTTTGTTAAGAATGAGTCCGAGATGTTTGGTTTCACTGAAGGGTGCCTCCCAATGGCTAGATGGGATGAGCTTAATATCTTTTTCAAAAAAGCAGGGGCTAAGATCGTCTTTGGATTAAATGCTCTTAATGGGAAAACAATAAAATCTGGTAAAGCAGTTGGACCTTGGAACTACACGAATGCCGAATCCTTTATTCATTACACCGTTGGAATGAATTACATAATTCATGGATGGGAGCTTGGCAATGAATTGAGTGGGAGTGGAGTTGGAACGAAAATTGATGCTGGGCAATATGCTTCTGATTTAGTTTCTCTACGAAACATAGTAGATAATGCATATAATGATGCCAAGCCTGAGCCACTAGTGATCGCTCCTGGAGGTTTCTTTGATGCAACTTGGTTCAAAGAATTTATAAGCAAAGCGGGAAAATCCTTGGATGTGGTTACCCACCACATCTATAACCTTGGGCCAGGTGTTGACGAGCACCTTGTGGAGAAAATTCTCAATCCTTCCTTTCTTGATGGAGAAGCAAGCACATTCAAAGCCCTCCAAAATTTAATTCAAAGTTCAGGAACCTCAGCAACAGCATGGGTTGGTGAGTCCGGAGGGGCTTACAACAGTGGCCATCATCTTGTGTCAGATGCATTTGTCTACAGCTTTTGGTATTTGGATCAGCTTGGCATGTCAGCTACTTATGATACTAAAACATATTGCAGACAGAGTTTGATAGGAGGAAATTACGGTTTACTCAATACTACAAATTTCCAGCCAAATCCAGACTACNNNNNNNNNNNNNNNNNCGTCCTACGTCGAAGAATTGCTCTTCTTTGGCACCGACTCATGGGAAGACATGTACTGTCAACAACTTTCTCTGGAACAAACAAAATAAGAGCATATGCCCACTGTGCAAAGCAATCCGGAGGGATCACAGTACTGTTGATCAATCTGGACAACAGCACAACCGTAGTGGCCGAAGTGTCATTGAGTAACGCCAATATTTTTAGGCACAGAAAGATGTCTATTAATTCAGAACTTATGGCAATACCTCTGCAAAGTGCGAATGAAAAATCAAGAGAAGAATACCATCTAACTCCACAGGATAGGAACATACATAGCCAAGTCATGGTTCTAAATGGGAAGACTCTAACGGTAAACACGGATAATGAGATCCCCACTTTGGAGCCTCTGTATGTGAACCCATCAGAGCCTATAACGGTTGCCCCTTTCTCTATTGTTTTTGCTCATATACCTGATGCCAATATCGCATCTTGCAGCTAG 1635 0.4165 MGSWIVQLLMLLRLLSFVNSQVETGGDSHLKGIVAINAKSVIGTIDDDFVCATLDWWPPQKCDYGRCSWGLASLLNLDLNNQLLLNAVKEFSPLKLRLGGSLQDKVIYGTEDYNKPCTPFVKNESEMFGFTEGCLPMARWDELNIFFKKAGAKIVFGLNALNGKTIKSGKAVGPWNYTNAESFIHYTVGMNYIIHGWELGNELSGSGVGTKIDAGQYASDLVSLRNIVDNAYNDAKPEPLVIAPGGFFDATWFKEFISKAGKSLDVVTHHIYNLGPGVDEHLVEKILNPSFLDGEASTFKALQNLIQSSGTSATAWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSATYDTKTYCRQSLIGGNYGLLNTTNFQPNPDYXXXXXXVLRRRIALLWHRLMGRHVLSTTFSGTNKIRAYAHCAKQSGGITVLLINLDNSTTVVAEVSLSNANIFRHRKMSINSELMAIPLQSANEKSREEYHLTPQDRNIHSQVMVLNGKTLTVNTDNEIPTLEPLYVNPSEPITVAPFSIVFAHIPDANIASCS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02405 544 Gene3D Glycosidases 68 384 - -
Adu03g02405 544 PANTHER HEPARANASE-LIKE PROTEIN 3 17 543 - -
Adu03g02405 544 PANTHER HEPARANASE-RELATED 17 543 - -
Adu03g02405 544 Pfam Glycosyl hydrolase family 79, N-terminal domain 32 346 IPR005199 GO:0016020|GO:0016798
Adu03g02405 544 SUPERFAMILY (Trans)glycosidases 45 382 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02405 Adu-Chr3 62001003 62004719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02405 1 544 Glycoside Hydrolase AT5G61250 45.668 6.29e-175 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02405 K07964 - gmx:100802477 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02405 03 62001003 62004719 Adu03g02405 03 62001003 62004719 ECH
Adu01g02372 01 91202849 91205877 Adu03g02405 03 62001003 62004719 PCT