Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02372 ATGGGTTCTTTGATTATAAGGCTTGTGGGTCTGTTCTACTTGGTGGTGAGTTTGTTGAGCTTCATTGGAGTGAATGCTATGCATGGAAGGGAAAGTAGTGGATATGAAGCAGTGAAAGGGATAATTTTGATACATGGGAAATCTCACATTGGAAGAATTGATGATGATTTTGTCTGTGCAACTCTTGATTGGTGGCCTCCTCAGAAATGTGACTATGGAACATGTAGCTGGGGTCATGCTTCTCTTCTCAACCTGGACCTCAACAACAAAATATTGTTAAATGCAGTAAAAGCATTTTCACCATTGAAGATTAGGTTAGGTGGCACCTTGCAAGATAAGGTCATATATGGGACTGAAGATAGTCCAAAACCATGTACTCCTTTTGTTAACAGCTCCTCTGAGATATTTGGATTCACTGAAGGATGCTTACCAATGCATAGATGGGATGAGCTGAACAGCTTTTTCCAAAAAGCAGGGGCTAAGGTTATCTTTGGATTGAATGCTCTTGCTGGAAGAACATTACAATCTGGTTCTGCAGTTGGACCATGGAACTCTTCCAATGCCGAATCTTTTATCCGTTACACTGTAAGAAAGAATTACAGCATTGCTGGTTGGGAATTTGGCAATGAATTGTGCGGGAGTGGAGTTGGAACAAGTGTTTCTGCAGATCAATATGCTTCTGATATTGCTGCATTAAGAAACATAATTCATGATGTATATAGAGGGATTAGGCATAAGCCACTGGTCATTGCTCCCGGTGGCTTCTATGATGCAAACTGGTTCCAGGAATTTGTAAACAAATCTGGTAAATCTGTTGATGTGGTATCTCACCACATATATAACCTTGGAGCAGGAGTTGATGAGCACCTAATTGAAAGAATTCTTGATCCATCATATCTTGATGGAGTGGCTAGCACATTCAGTGGCCTCAAAAACATACTTCAAAATTCAGCAACCAAAGCAAAAGCATGGGTTGGTGAGGCAGGAGGGGCTTACAACAGTGGCCACCATCTTGTGTCTGATGCATTTGTCTACAGCTTCTGGTATTTGGATCAGCTTGGAATGTCAGCTGTTTATGACACCAGAACATACTGCAGACAGAGTTTGGTTGGAGGAAACTATGGTTTACTAAACACTTCTACTTTTGTGCCAAATCCAGATTATTATAGTGCTCTTCTTTGGCACAGACTTATGGGAGTACGTGTCCTTGCAACTTCCTTCTATGGGACAAAGAAGATAAGAGCTTATGCACACTGTGCAAAGCAATCTAAAGGAATCACAATACTATTGCTGAATCTGGACAACAGCACCAGTGTTCATGCAAAAGTGGACTTCACATACTCAAAGACAGGTGCAACTGCCAGAGAAGAATACCATTTAACTGCACAGGATAGGGACTTACATAGCCAAACCACATTACTAAATGGAAAAGTTCTAACTGTCTCAGCAGCAGGGGATATTCCTCCTTTGAATCCTCTATATGTAAATCCATCAATGCCAATCATAGTTGGTCCTCTCTCTCTAGTATTTGCACATATACCAGATGTTGATATCCCAGCATGTTCTTAG 1569 0.4105 MGSLIIRLVGLFYLVVSLLSFIGVNAMHGRESSGYEAVKGIILIHGKSHIGRIDDDFVCATLDWWPPQKCDYGTCSWGHASLLNLDLNNKILLNAVKAFSPLKIRLGGTLQDKVIYGTEDSPKPCTPFVNSSSEIFGFTEGCLPMHRWDELNSFFQKAGAKVIFGLNALAGRTLQSGSAVGPWNSSNAESFIRYTVRKNYSIAGWEFGNELCGSGVGTSVSADQYASDIAALRNIIHDVYRGIRHKPLVIAPGGFYDANWFQEFVNKSGKSVDVVSHHIYNLGAGVDEHLIERILDPSYLDGVASTFSGLKNILQNSATKAKAWVGEAGGAYNSGHHLVSDAFVYSFWYLDQLGMSAVYDTRTYCRQSLVGGNYGLLNTSTFVPNPDYYSALLWHRLMGVRVLATSFYGTKKIRAYAHCAKQSKGITILLLNLDNSTSVHAKVDFTYSKTGATAREEYHLTAQDRDLHSQTTLLNGKVLTVSAAGDIPPLNPLYVNPSMPIIVGPLSLVFAHIPDVDIPACS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02372 522 Pfam Glycosyl hydrolase family 79, N-terminal domain 41 354 IPR005199 GO:0016020|GO:0016798
Adu01g02372 522 Gene3D Glycosidases 73 396 - -
Adu01g02372 522 PANTHER HEPARANASE-LIKE PROTEIN 3 8 444 - -
Adu01g02372 522 PANTHER HEPARANASE-LIKE PROTEIN 3 448 521 - -
Adu01g02372 522 PANTHER HEPARANASE-RELATED 448 521 - -
Adu01g02372 522 PANTHER HEPARANASE-RELATED 8 444 - -
Adu01g02372 522 SUPERFAMILY (Trans)glycosidases 53 398 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02372 Adu-Chr1 91202849 91205877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02372 34 522 Glycoside Hydrolase AT5G61250 48.748 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02372 K07964 - gmx:100778008 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02372 01 91202849 91205877 Adu01g02372 01 91202849 91205877 ECH
Adu01g02372 01 91202849 91205877 Adu03g02405 03 62001003 62004719 PCT