Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02665 ATGGCTTTTTCTCCATACAAAATTCTCTCTCTCATTTCTATCATCTTCACCATCTTCACTTCAATGGTATCATCATTGATAACCACACCAAACAATAACAACACCAGTACTATAACCATTCCTCTATCTCCATTATTATTCACAAACAACAAGCACAATAATAACAACCCCCCTAATTCTTCATTATATCAATACCAATCCCTCAAACTCCATGCTTATGCTTCCATAACAAGAGCCCACCACCTCAAACACCATAAAGCCAAAAAAGGCTCATCTCCCTCCATCATCAAAACCCAAGTTCACCCTAAAAGCTATGGAGGGTACTCCATAGACCTTAAATTTGGAACACCACCACAAACATTCTCTTTTGTTTTGGACACAGGAAGCAGCCTTGTATGGCTACCATGTTCATCTCATTACCTATGTTCCAAATGTAACATAGACACTAACAAGATTTCAACATTCATTCCCAAGAAATCCTCCACTTCCAAGCTCATAGGATGCAAAAGCCCTAAATGTGCATGGATTTTCGGGCCCAATGTACAATGTCAAAATTGCCAAGAAAAAAAACAAAATAATTGCTCGCAGATTTGTCCGGCCTATACAGTTCAGTATGGACTGGGCACAACTGCGGGCTTTCTCCTCTCGGAGAATTTAAATCTCCCTAAAAAAATTGTACCTAATTTTCTTGTAGGATGTTCTGTTCTTTCCATGTACCAACCCGCTGGTATAGTCGGATTAGGACGTGGACCAGAGTCATTGCCACGTCAGATGAACCTCAAGAAATTTTCTTATTGTTTACTCTCTCATCACCGCTTCGACGACTCCCGGGAGGCCTCCGACCTCGTCTTACATGGCGGTAGAACGGCCGGAAAAACCGCCGGCGTTAGTTACACGCCGTTCGACAAAAATCCGGCAGGGGAAAACACCGCATTTGCGACCTACTATTACATTCCAATCCGGAAGGTAATTGTTGGTGGGAAACATGTTAAGATTCCGGCGAATCTTCTAGAACCGGATTCCGCCGGAAACGGCGGTTCCATAGTGGATTCTGGAACCACGTTCACGTTCATGGACAAGCCAATTTTCGATGCGGTGGCGCGTGAGTTCGAGAACCAAGTGAATCTCACAAGGAATAGGGTGGTTGAGAAGCGTTCAGGGCTGAGTCCATGTTTCACCGTCGCCGCCAACAACAAAACGACGTCGTTTCCGGCTCTAACATTGCAATTCAGAGGCGGCGCCAAGATGATTCTCCCGCCAGAAAATTATTTTTCTTTTGTTGGAGCAAAGTCTGACGTGGCGTGTTTTACAATTGTTTCCGATGAAGGATCTGCGGCGACACCGTCGGCGGCGCGTGGACCTGCGGTGATTTTGGGGAACTATCAGCAACAGAATTTCTACGTGGAATATGATTTGGAGAATGAGAAGTTTGGATTTCGGCGTCAAAATTGTAAACGCAGTGGTTAG 1467 0.4458 MAFSPYKILSLISIIFTIFTSMVSSLITTPNNNNTSTITIPLSPLLFTNNKHNNNNPPNSSLYQYQSLKLHAYASITRAHHLKHHKAKKGSSPSIIKTQVHPKSYGGYSIDLKFGTPPQTFSFVLDTGSSLVWLPCSSHYLCSKCNIDTNKISTFIPKKSSTSKLIGCKSPKCAWIFGPNVQCQNCQEKKQNNCSQICPAYTVQYGLGTTAGFLLSENLNLPKKIVPNFLVGCSVLSMYQPAGIVGLGRGPESLPRQMNLKKFSYCLLSHHRFDDSREASDLVLHGGRTAGKTAGVSYTPFDKNPAGENTAFATYYYIPIRKVIVGGKHVKIPANLLEPDSAGNGGSIVDSGTTFTFMDKPIFDAVAREFENQVNLTRNRVVEKRSGLSPCFTVAANNKTTSFPALTLQFRGGAKMILPPENYFSFVGAKSDVACFTIVSDEGSAATPSAARGPAVILGNYQQQNFYVEYDLENEKFGFRRQNCKRSG 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02665 488 ProSiteProfiles Peptidase family A1 domain profile. 108 480 IPR033121 -
Adu02g02665 488 SUPERFAMILY Acid proteases 104 484 IPR021109 -
Adu02g02665 488 PRINTS Pepsin (A1) aspartic protease family signature 114 134 IPR001461 GO:0004190|GO:0006508
Adu02g02665 488 PRINTS Pepsin (A1) aspartic protease family signature 347 358 IPR001461 GO:0004190|GO:0006508
Adu02g02665 488 PRINTS Pepsin (A1) aspartic protease family signature 456 471 IPR001461 GO:0004190|GO:0006508
Adu02g02665 488 Gene3D Acid Proteases 90 276 IPR021109 -
Adu02g02665 488 Gene3D Acid Proteases 287 487 IPR021109 -
Adu02g02665 488 Pfam Xylanase inhibitor C-terminal 316 480 IPR032799 -
Adu02g02665 488 PANTHER OS07G0603500 PROTEIN-RELATED 14 484 - -
Adu02g02665 488 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 123 134 IPR001969 GO:0004190|GO:0006508
Adu02g02665 488 CDD pepsin_A_like_plant 107 484 IPR034161 -
Adu02g02665 488 Pfam Xylanase inhibitor N-terminal 108 272 IPR032861 -
Adu02g02665 488 PANTHER BNACNNG47670D PROTEIN 14 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02665 Adu-Chr2 92519886 92521512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02665 106 486 Miscellaneous Gene Families AT1G44130 23.833 9.59e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02665 - - adu:107476162 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02665 02 92519886 92521512 Adu02g02665 02 92519886 92521512 ECH
Adu06g01827 06 74862237 74863822 Adu02g02665 02 92519886 92521512 PCT