Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02836 ATGAAGACGGTGTCGGAATGGATGGATTCCTGTTCGAAAGAGCAGATGCAGATTTACCAGCAATGGTTCAACTTGGCCGATTCAGATGGAGATGGCCGTATCACTGGCAACGATGCTACCAAGTTCTTTGCTCTCTCCAACTTATCCCGCCCTCAACTCAAGCAGGTCTGGGATATTGCCGCAAATAAAAGACAAGGATTTCTAGGTTTCGCGGAGTTTGTTACGGCAATGCAGCTTGTCGCGTTGGCCCAGGCAGGATATGATCTCAACTCGGATATCCTTAAAACTCAGATTGACACTGAAAATATCAAACCTCCAGTCATGGAAGGAACTGATGCTTTAGTAGCAAAAACTCAGAGTTTAACAATAAGTGGCCAACATGATGTAAATGCGACTCAACTTCAGCCATCTACTTCATTCGTTTCAAAACCACCGGTAAAGAAATTACCTCTGAATGCAGTTACATCAATAATTGATGGCTTGAAGAGGTTATATGTCGAGAGGGTAAAGCCATTGGAAGTCACTTATCAATTCAATGATTTTGTATCTCCATTATTGACAAATAGTGATTTTGATGCGAGACCAATGGTCATGCTTCTTGGACAATATTCTACAGGAAAAACAACATTTATCAAACATTTGCTAAGATGTGATTATCCAGGTGCACACATTGGACCAGAGCCTACAACTGACAGATTTGTTGCTGTCATGTCTGGACCTGATGAGAGGACTATTCCTGGAAATACCGTGGCTGTTGATGCTAACATGCCTTTTAGTGGATTGACAACTTTTGGTGGTTCATTCTTGTCAAAGTTCCAATGCTCCCAAATGCCACATCCATTGCTGGATGAAATAACATTTATCGACACTCCTGGTGTCCTCTCAGGAGAAAAGCAAAGGACTCAAAGAAGTTATGACTTTACTGGGGTTATATCTTGGTTTGCTGCAAAATGTGATCTGATTCTTCTTCTATTTGATCCTCATAAACTTGACATCAGTGATGAATTTAAACGCGTAATAGCATCTCTAAGAGGTCATGATGACAAGATACGTGTGGTTTTGAATAAGGCAGACCAAGTTGACACTCAACAACTTATGAGAGTTTATGGAGCATTGATGTGGTCATTAGGAAAAGTTCTAAATACTCCAGAAGTTGTGCGTGTATATATTGGCTCATTTAATGATAAGCCTATGCAAGAAGGCTTTGTTGGACCGCTAGGACAAGAACTATTTGAGAAGGAACAGAATGATCTCCTTGCAGATTTGGTAGATATTCCAAGAAAGGCTTGTGACAGTCGGATCAATGAATTTGTTAAACGTGCTAGAGCTGCTAAAATGCATGCATATATAATTAGCCATCTTAAGAAGGAGATGCCTGCAATGATGGGAAAAGCTAAGACCCAACAAAGGCTCATCGATAATCTCGAAGAAGAATTTAGAAAGGTTCAAAGGGAGTTTCATCTACCAGCTGGTGATTTTCCCAATGTGGAGCACTTTAGAGAGGTTTTGAGTGGTTATAGCATTGACAGATTTGAGAAACTGAAGCCCAAAATGATTCAAGCAGTAGATGACATGCTTGGATATGAAATACCAGAGCTATTAAAGAAATTCAGAAATCCTTATGATTGA 1629 0.4021 MKTVSEWMDSCSKEQMQIYQQWFNLADSDGDGRITGNDATKFFALSNLSRPQLKQVWDIAANKRQGFLGFAEFVTAMQLVALAQAGYDLNSDILKTQIDTENIKPPVMEGTDALVAKTQSLTISGQHDVNATQLQPSTSFVSKPPVKKLPLNAVTSIIDGLKRLYVERVKPLEVTYQFNDFVSPLLTNSDFDARPMVMLLGQYSTGKTTFIKHLLRCDYPGAHIGPEPTTDRFVAVMSGPDERTIPGNTVAVDANMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITFIDTPGVLSGEKQRTQRSYDFTGVISWFAAKCDLILLLFDPHKLDISDEFKRVIASLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVVRVYIGSFNDKPMQEGFVGPLGQELFEKEQNDLLADLVDIPRKACDSRINEFVKRARAAKMHAYIISHLKKEMPAMMGKAKTQQRLIDNLEEEFRKVQREFHLPAGDFPNVEHFREVLSGYSIDRFEKLKPKMIQAVDDMLGYEIPELLKKFRNPYD 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02836 542 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 191 426 IPR030381 GO:0005525
Adu01g02836 542 Gene3D - 10 108 - -
Adu01g02836 542 PANTHER CALCIUM-BINDING EF HAND PROTEIN 20 540 - -
Adu01g02836 542 Pfam Domain of unknown function (DUF5600) 433 533 IPR040990 -
Adu01g02836 542 Coils Coil 465 485 - -
Adu01g02836 542 PANTHER EH DOMAIN 20 540 - -
Adu01g02836 542 Gene3D - 161 533 - -
Adu01g02836 542 CDD EH 19 85 IPR000261 GO:0005515
Adu01g02836 542 Pfam N-terminal EH-domain containing protein 160 192 IPR031692 -
Adu01g02836 542 SUPERFAMILY EF-hand 5 89 IPR011992 -
Adu01g02836 542 Pfam Dynamin family 197 356 IPR045063 -
Adu01g02836 542 Gene3D - 197 425 IPR027417 -
Adu01g02836 542 CDD EHD 196 440 - -
Adu01g02836 542 ProSiteProfiles EF-hand calcium-binding domain profile. 14 49 IPR002048 GO:0005509
Adu01g02836 542 ProSiteProfiles EH domain profile. 15 109 IPR000261 GO:0005515
Adu01g02836 542 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 465 IPR027417 -
Adu01g02836 542 Pfam Cytoskeletal-regulatory complex EF hand 15 80 IPR000261 GO:0005515
Adu01g02836 542 SMART eh_3 8 103 IPR000261 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02836 Adu-Chr1 98594440 98599846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02836 10 542 EF-hand Containing Proteins AT4G05520 75.701 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02836 K12483 - gmx:100786047 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02836 01 98594440 98599846 Adu04g00452 04 5353125 5357424 PCT