Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00115 ATGGTGTCTCTCAGTTTCCCACAGTTCCACTTCCATCTATTTCTGATCATTTCAGGTTTGGGAGTGATATCCACCGTTGAATCAAAGACACATTGGGGTGACGCACAAGTTCTGAAGGAACTAAAGAACAAAATCGACCCCTCTTCTCTGACTCCAGGTTCATGCGTAAGCTCATGGAACTTCACCGTGGACCCATGCGACAACCTCTTCACCGAAAAGTTCACGTGCGGTTTCAGGTGCGACTCGGTTGTTTCCGGTTTAAGCCGAGTCACCGAACTCAGTCTCGACCAGGCGGGTTACTCCGGATCCCTCTCCTCCATCTTCTGGAACCTTCCCTACCTCGAAACCCTCGACGTTTCAAACAACTACTTCTCAGGCCAAATTCCCGAGTCATTTTCAAATCTGACTCGCTTGAGTCGACTCAGTCTTTCGCGAAACTCGTTCACCGGCGAAATTCCTTCTTCCCTTGGCTCCCTCTCCATGCTCGAAGAACTCTACCTGGATAACAACAATCTCGAAGGAACAATCCCTGAGAGTTTCAATAACGGGCTCAAAACCTTGAAAAGGCTTGAAATTCAGTTCAACAACCTCAACGGAGAACTTCCGAAGAATTTTGATTCTCTCAAAAACCTTAACTACTTAGACCTCAGTGACAATGGCGTCACCGGAAAATTGCCGGAGGCTTTACCGGAGTTTTTGGTTCAGATTTCAATGCGAAACAACTCCTTAAGCGGTTATTTACAACCCGAGAGCTTCACGAAGCTGAAATATCTTGAGGTTCTTGATTTGAGTTACAACAATTTCAGTGGCTCAGTCCCTTTCAGTCTCTTTCAGATTCCCTCACTGGAGCAACTAACACTCTCTTTCAACAAATTCTCTTCCATGAACTTAGCGTCACGTTACGCATTGGACTACTTGCAAAGCGGACTCATAGCGGTTGATCTGAGCAACAACGAGATTGAGGGGTTCTTGCCGATGTTCTTGGCGATGATGCCGAAGCTTGCATCTTTGTCAATGGAGAACAACAAGTTGAGTGGTATGATACCGACTCAGTTTGCATTGAAGACGGTTTTGCCTGAACCGGGGGTTTCGCCATTTGAGAGGCTTCTGTTGGGAGGGAATTACTTGTTTGGAGGTATACCGAGTCCTCTAATGGCGCTTAAACCGGGTTCTGCAAATGTGAGGCTTGTCGGTAATTGCTTGTATCGGTGTCCTCTTATCTTCTTTTTCTGTCAAGGTGGCAACCAAAAATCGTATCAAGAATGTAAGAGATTCGGACACTTCATCCCTTAG 1293 0.4625 MVSLSFPQFHFHLFLIISGLGVISTVESKTHWGDAQVLKELKNKIDPSSLTPGSCVSSWNFTVDPCDNLFTEKFTCGFRCDSVVSGLSRVTELSLDQAGYSGSLSSIFWNLPYLETLDVSNNYFSGQIPESFSNLTRLSRLSLSRNSFTGEIPSSLGSLSMLEELYLDNNNLEGTIPESFNNGLKTLKRLEIQFNNLNGELPKNFDSLKNLNYLDLSDNGVTGKLPEALPEFLVQISMRNNSLSGYLQPESFTKLKYLEVLDLSYNNFSGSVPFSLFQIPSLEQLTLSFNKFSSMNLASRYALDYLQSGLIAVDLSNNEIEGFLPMFLAMMPKLASLSMENNKLSGMIPTQFALKTVLPEPGVSPFERLLLGGNYLFGGIPSPLMALKPGSANVRLVGNCLYRCPLIFFFCQGGNQKSYQECKRFGHFIP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00115 430 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 11 427 - -
Adu01g00115 430 Gene3D Ribonuclease Inhibitor 303 402 IPR032675 -
Adu01g00115 430 SMART LRR_typ_2 135 158 IPR003591 -
Adu01g00115 430 SMART LRR_typ_2 331 354 IPR003591 -
Adu01g00115 430 SMART LRR_typ_2 255 279 IPR003591 -
Adu01g00115 430 SMART LRR_typ_2 159 182 IPR003591 -
Adu01g00115 430 SMART LRR_typ_2 208 232 IPR003591 -
Adu01g00115 430 SMART LRR_typ_2 111 134 IPR003591 -
Adu01g00115 430 Gene3D Ribonuclease Inhibitor 200 302 IPR032675 -
Adu01g00115 430 Gene3D Ribonuclease Inhibitor 33 199 IPR032675 -
Adu01g00115 430 SUPERFAMILY L domain-like 70 411 - -
Adu01g00115 430 Pfam Leucine Rich repeat 209 223 IPR001611 GO:0005515
Adu01g00115 430 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 11 427 - -
Adu01g00115 430 Pfam Leucine rich repeat 239 292 IPR001611 GO:0005515
Adu01g00115 430 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00115 Adu-Chr1 1650269 1651966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00115 64 384 Receptor kinase-like Gene Family AT1G08590 33.531 3.88e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00115 - - adu:107478747 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00115 01 1650269 1651966 Adu01g00115 01 1650269 1651966 ECH
Adu01g00115 01 1650269 1651966 Adu05g00880 05 10899653 10901162 ECH
Adu05g00880 05 10899653 10901162 Adu01g00115 01 1650269 1651966 PCT