Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00561 ATGGGCTGTTTGTCCTCTAAGGAAGCAAGTAAGAGAAAGTATCCTATGAGAGAGGATCCTTCAGTTCTTGCATCGGAAACAGCATTCAGTGTGAGCGAGGTTGAAGCACTGTTTGAGCTTTTCAAGAGCATCAGCAGTTCAGTCGTTGATGATGGATTAATCAGCAAGGAAGAGTTTAACTTGGCAATTTTCGACAATAAAAAGAAGGATAATCTCTTTGCCGGTCGAATCTTTGATATGTTTGATGTTAAGAAGAAGGGAGCCATTGATTTTGGCGATTTTGTTAGATCACTCAGCGTCTTCCACCCAAAAGCATCACTGCAAGACAAGATAGATTTCTCATATAGGCTTTACGATTTGCACAATACCGGTTTTATTGAGCGCCAAGTGGTCAAACAAATGTTAATTGCTTTCCTTTCAGAATCTGAAACAAAGTTGGCCGATGATGCATTAGAAAAAATTCTTGATAAGACTTTCTTGGATGCTGATATAAATCGAGATGGGAAAATAGACAAGTTCGAATGGGAAAACTTGGTTTCCAAGAACCCATCGCTACTAAAAGTCATGACCCTACCCTACCTGAGGGACATAACAACCACGTTCCCAAGCTTTATTTTTAATTCCAAGGTCGACGAAATCACAAAGTGA 648 0.3981 MGCLSSKEASKRKYPMREDPSVLASETAFSVSEVEALFELFKSISSSVVDDGLISKEEFNLAIFDNKKKDNLFAGRIFDMFDVKKKGAIDFGDFVRSLSVFHPKASLQDKIDFSYRLYDLHNTGFIERQVVKQMLIAFLSESETKLADDALEKILDKTFLDADINRDGKIDKFEWENLVSKNPSLLKVMTLPYLRDITTTFPSFIFNSKVDEITK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00561 215 SUPERFAMILY EF-hand 21 204 IPR011992 -
Accr9g00561 215 PANTHER CALCINEURIN B 2 212 IPR045198 GO:0005509|GO:0019722|GO:0019900
Accr9g00561 215 Pfam EF hand 155 179 IPR002048 GO:0005509
Accr9g00561 215 Gene3D - 19 213 - -
Accr9g00561 215 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Accr9g00561 215 ProSitePatterns EF-hand calcium-binding domain. 163 175 IPR018247 -
Accr9g00561 215 FunFam calcineurin B-like protein 3 19 212 - -
Accr9g00561 215 ProSiteProfiles EF-hand calcium-binding domain profile. 150 185 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00561 Accr-Chr9 6450456 6452914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00561 1 214 EF-hand Containing Proteins AT4G17615 74.299 7.72e-115 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00561 K06268 - pop:18096901 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00561 9 6450456 6452914 Accr10g00352 10 5671815 5675075 CCT
Accr9g00561 9 6450456 6452914 Accr9g00561 9 6450456 6452914 ECH