Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00550 ATGGCCGTTCAAGCTCAATACCCATCCAATATTCTCCTCCTCAACAGAAATGAACAGGAAGGACATGATTATTCGTTACAGCCACAAGCAGGAGGGCTTCTTGATCAGTCTCATATCTTATTCAACAATGGAGGTACTAATAATTCTCGCAAGAGAGGAAGAGAAGCAGCGATGGCCACCTGCGTCGGTCAAACAGCTCATAACGGTGTTAATTCCTTCTCTTTGCAATCCCAGGCTCCTCAGCTCGTAGAACTCTCTCAACTCCATAACCAACAACCAAATGTAGTCTCCACAGGCCTCCGATTATCATTCGGCGATCATCAACAGCAGCAGCAACAGAGACTACAATTACAGCAACAACGCCAACAACAACAAGCCTATCAGCCCTATGCTTTCTTATCTTTATTGCCCGAAGGACTTTCCTCCCAAATCAAACAACAGCGTGATGAGATTGATCAATTTCTCCAAGCCCAGGGAGAACAATTGCGACGGGCATTAGCGGAGAAGAGACAGAGGCATTATCGTGCACTTCTAAGCGTGGCGGAAGAATCGGTGGCGCGGCGGTTGAGAGAGAAGGAGGTAGAGATGGAAAAAGCAACGCGCAGGAATGCCGAGTTAGAAGAGCGCGCGGCGCAACTTAGCGTGGAGGCGCAGGTTTGGCAGGCAAAGGCAAAGGCACAGGAGGCAACAGCGGCGTCTCTGCAAGCGCAACTGCAACAGGCTATGATGAGCGGCGGTGCGCAGGATAAAGCAGGGTGTTTTGTGGAGGACGGAGGGCTATCTTGCGCGGTGGGTGGTGGTGAGGGCCAACCGGAGGACGCCGAGTCAGCGTATATTGACCCGGACCGAGTTGTGGAATCGGGACCCAAATGCAGAGGGTGTGGGAAGCGAGTGGCATCGGTGGTGGCATGGCCGTGTCGGCACCTATGCATCTGCACGGAATGCGACGCGCACTTCCGAGCGTGTCCTGTGTGCCTGACACTCATAAATTCAACCGTTGAAGTCTTCCTGTCGTAG 1017 0.5241 MAVQAQYPSNILLLNRNEQEGHDYSLQPQAGGLLDQSHILFNNGGTNNSRKRGREAAMATCVGQTAHNGVNSFSLQSQAPQLVELSQLHNQQPNVVSTGLRLSFGDHQQQQQQRLQLQQQRQQQQAYQPYAFLSLLPEGLSSQIKQQRDEIDQFLQAQGEQLRRALAEKRQRHYRALLSVAEESVARRLREKEVEMEKATRRNAELEERAAQLSVEAQVWQAKAKAQEATAASLQAQLQQAMMSGGAQDKAGCFVEDGGLSCAVGGGEGQPEDAESAYIDPDRVVESGPKCRGCGKRVASVVAWPCRHLCICTECDAHFRACPVCLTLINSTVEVFLS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00550 338 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 43 335 IPR017066 -
Accr9g00550 338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 338 IPR013083 -
Accr9g00550 338 Coils Coil 182 244 - -
Accr9g00550 338 PIRSF SBP1_RNase_bind 1 338 IPR017066 -
Accr9g00550 338 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 273 337 - -
Accr9g00550 338 Pfam Zinc finger, C3HC4 type (RING finger) 290 331 - -
Accr9g00550 338 ProSiteProfiles Zinc finger RING-type profile. 291 325 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00550 Accr-Chr9 6297300 6298647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00550 291 338 Miscellaneous Gene Families AT2G21380 33.333 9.07e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00550 K19042 - qsa:O6P43_024439 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00550 9 6297300 6298647 Accr10g00335 10 5497079 5498362 CCT
Accr9g00550 9 6297300 6298647 Accr9g00550 9 6297300 6298647 ECH